Pre_GI: BLASTP Hits

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Query: NC_003063:1358738:1368052 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 1368052, End: 1368438, Length: 387

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003305:693810:706318706318706704387Agrobacterium tumefaciens str. C58 chromosome linear, completeacetyltransferase5e-71265
NC_010572:188500:197464197464197859396Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative acetyltransferase1e-24112
NC_009664:4696961:471384347138434714274432Kineococcus radiotolerans SRS30216, complete genomeGCN5-related N-acetyltransferase2e-1580.9
NC_017955:3670670:367067036706703671068399Modestobacter marinus, complete genomehypothetical protein4e-1477
NC_009464:300422:315585315585316025441Uncultured methanogenic archaeon RC-I, complete genomeputative acetyltransferase (GNAT family)7e-0752.8
NC_013171:824917:837249837249837653405Anaerococcus prevotii DSM 20548, complete genomeGCN5-related N-acetyltransferase8e-0752.4