Pre_GI: BLASTP Hits

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Query: NC_002971:211331:241159 Coxiella burnetii RSA 493, complete genome

Start: 241159, End: 242379, Length: 1221

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:5877164:5883085588308558842721188Paenibacillus terrae HPL-003 chromosome, complete genometrans-2-enoyl-CoA reductase3e-136485
NC_014931:5088125:5121525512152551227211197Variovorax paradoxus EPS chromosome, complete genomeTrans-2-enoyl-CoA reductase (NAD(+))2e-123442
NC_020211:2123819:2140338214033821415371200Serratia marcescens WW4, complete genometrans-2-enoyl-CoA reductase2e-122439
NC_015567:2039443:2057446205744620586451200Serratia sp. AS9 chromosome, complete genomereductase2e-122439
NC_015566:2039431:2057434205743420586331200Serratia sp. AS12 chromosome, complete genomereductase2e-122439
NC_008262:2242432:2262676226267622638451170Clostridium perfringens SM101, complete genomealcohol dehydrogenase, short-chain family2e-122439
NC_003366:2356148:2376317237631723774861170Clostridium perfringens str. 13, complete genomehypothetical protein3e-122438
NC_010694:1966676:1980846198084619820451200Erwinia tasmaniensis, complete genomePutative short-chain alcohol dehydrogenase3e-121435
NC_008391:1768456:1790042179004217912441203Burkholderia cepacia AMMD chromosome 2, complete sequenceshort-chain alcohol dehydrogenase3e-117422
NC_020209:945000:9667839667839679761194Pseudomonas poae RE*1-1-14, complete genometrans-2-enoyl-CoA reductase4e-116418
NC_018604:2377549:2397403239740323985781176Brachyspira pilosicoli WesB complete genometrans-2-enoyl-CoA reductase6e-116417
NC_010552:2541100:2561409256140925626111203Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceTrans-2-enoyl-CoA reductase (NAD(+))7e-116417
NC_019908:2285819:2286759228675922879341176Brachyspira pilosicoli P43/6/78 chromosome, complete genometrans-2-enoyl-CoA reductase2e-115416
NC_016147:151224:1692351692351704401206Pseudoxanthomonas spadix BD-a59 chromosome, complete genometrans-2-enoyl-CoA reductase8e-112404
NC_013517:2909798:2926129292612929273221194Sebaldella termitidis ATCC 33386, complete genomeTrans-2-enoyl-CoA reductase (NAD(+))2e-106386
NC_009348:47974:4797447974492811308Aeromonas salmonicida subsp. salmonicida A449, complete genometrans-2-enoyl-CoA reductase4e-98358
NC_018750:6237875:6246562624656262477761215Streptomyces venezuelae ATCC 10712, complete genomeShort-chain alcohol dehydrogenase family9e-77287
NC_015953:5865733:5883148588314858843681221Streptomyces sp. SirexAA-E chromosome, complete genometrans-2-enoyl-CoA reductase (NAD(+))1e-74280
NC_018750:6717315:672610267261026727094993Streptomyces venezuelae ATCC 10712, complete genomedehydrogenase2e-65250