Pre_GI: BLASTP Hits

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Query: NC_002944:1881405:1893345 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1893345, End: 1893992, Length: 648

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014830:3438504:348791634879163488551636Intrasporangium calvum DSM 43043 chromosome, complete genomeregulatory protein TetR5e-22104
NC_014830:3438504:348728134872813487919639Intrasporangium calvum DSM 43043 chromosome, complete genomeregulatory protein TetR5e-21100
NC_008705:2763131:278669227866922787315624Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family1e-1066.2
NC_008146:2744612:276880427688042769427624Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family1e-1066.2
NC_013510:3117837:314603831460383146595558Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family9e-1063.5
NC_009338:4869700:489432848943284894990663Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator5e-0961.2
NC_013406:3672857:371832137183213719007687Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016935:2567039:261829326182932618892600Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator7e-0960.8
NC_015690:2039215:206876320687632069362600Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator8e-0960.5
NC_015563:5162177:517872451787245179383660Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR3e-0858.9
NC_020302:3014483:304061930406193041248630Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator5e-0857.8
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator1e-0756.6
NC_016002:2453919:247109424710942471732639Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator2e-0755.8
NC_013595:9994000:100114381001143810012019582Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family2e-0755.8
NC_020126:7661551:768145276814527682090639Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator3e-0755.1
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator5e-0754.7
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator5e-0754.7
NC_016935:4038265:405841140584114059013603Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator5e-0754.3
NC_015690:3477573:349850234985023499104603Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator5e-0754.3
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR8e-0753.9
NC_018750:3481476:351235535123553512966612Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family7e-0753.9
NC_013510:888542:914627914627915241615Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family7e-0753.9
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator1e-0653.5
NC_009715:167513:182729182729183346618Campylobacter curvus 525.92 chromosome, complete genometranscription regulator protein1e-0653.5
NC_015497:4564339:458567145856714586306636Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_016907:152500:168261168261168893633Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceTetR family transcriptional regulator1e-0653.1
NC_008563:4707826:472109047210904721461372Escherichia coli APEC O1, complete genomeputative transcriptional repressor2e-0652.8
NC_006361:714944:724533724533725093561Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0652.8
NC_014976:684000:689323689323690003681Bacillus subtilis BSn5 chromosome, complete genomeTranscriptional regulator2e-0652.8
NC_015690:2674187:268368126836812684250570Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator2e-0652.4
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0652.4
NC_016935:3229500:323418232341823234751570Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator2e-0652.4
NC_007947:1703326:170922317092231709855633Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family2e-0652.4
NC_010508:1206498:122332512233251223957633Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family2e-0652.4
NC_004431:4319152:432716243271624327731570Escherichia coli CFT073, complete genomehypothetical protein2e-0652.4
NC_008268:6149576:615238661523866153054669Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, TetR family2e-0652.4
NC_011745:3405520:341233534123353412706372Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-0652.4
NC_014117:2608000:262618526261852626817633Burkholderia sp. CCGE1002 chromosome chromosome 1, completetranscriptional regulator, TetR family2e-0652.4
NC_014168:869746:906042906042906671630Segniliparus rotundus DSM 44985 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_011000:1262324:129188312918831292545663Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein3e-0652
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR3e-0651.6
NC_017221:495088:496425496425497156732Bifidobacterium longum subsp. longum KACC 91563 chromosome,AcrR family transcriptional regulator4e-0651.6
NC_008752:415599:420283420283420975693Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, TetR family6e-0651.2
NC_014623:4683671:468649946864994687191693Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator6e-0651.2
NC_019964:1873167:188650118865011887106606Halovivax ruber XH-70, complete genometranscriptional regulator5e-0651.2
NC_010625:1370462:139744613974461398036591Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, TetR family4e-0651.2
NC_010002:528529:533152533152533817666Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family7e-0650.8
NC_006349:2311817:818381838800618Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_006351:3159630:704370437660618Burkholderia pseudomallei K96243 chromosome 2, complete sequenceTetR-family regulatory protein7e-0650.8
NC_009075:3113393:714371437760618Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_007435:1825741:184612218461221846739618Burkholderia pseudomallei 1710b chromosome II, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_009078:3087759:706270627679618Burkholderia pseudomallei 1106a chromosome II, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_009079:2339756:818381838800618Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_008784:1151305:117237411723741172991618Burkholderia mallei SAVP1 chromosome I, complete sequencetranscriptional regulator, TetR family7e-0650.8
NC_016641:4151403:416411641641164164748633Paenibacillus terrae HPL-003 chromosome, complete genomeputative TetR family transcriptional regulator7e-0650.4
NC_019697:4108944:412618041261804126779600Chamaesiphon minutus PCC 6605, complete genometranscriptional regulator9e-0650.4