Pre_GI: BLASTP Hits

Some Help

Query: NC_002937:2933000:2944985 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Start: 2944985, End: 2946184, Length: 1200

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009050:427000:4404224404224416571236Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencetype II restriction endonuclease, putative2e-101369
NC_010814:243384:2666682666682678791212Geobacter lovleyi SZ, complete genomeRestriction endonuclease EcoRII6e-99361
NC_012751:1071589:1087074108707410882791206Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completetype II restriction endonuclease, EcoRII-C domain protein1e-87323
NC_016002:1:99289928111781251Pseudogulbenkiania sp. NH8B, complete genometype II restriction endonuclease2e-81302
NC_014228:3534378:3536284353628435375281245Xenorhabdus nematophila ATCC 19061, complete genomeputative Type II restriction endonuclease3e-78292
NC_008789:472500:4799434799434811781236Halorhodospira halophila SL1, complete genometype II restriction endonuclease, putative2e-77289
NC_014656:624561:6287746287746300361263Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein1e-64247
NC_011750:2928990:2933379293337929345931215Escherichia coli IAI39 chromosome, complete genomeType-2 restriction enzyme EcoRII (R.EcoRII) (Type II restriction enzyme EcoRII) (Endonuclease EcoRII)2e-39163
NC_016818:4215836:4225058422505842262751218Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeC terminal/Restriction endonuclease N-terminal6e-39162
NC_012214:3303955:3313524331352433147471224Erwinia pyrifoliae Ep1/96, complete genometype II restriction enzyme EcoRII6e-39161
NC_009832:622969:6342086342086354221215Serratia proteamaculans 568, complete genomeType II site-specific deoxyribonuclease1e-38160
NC_010102:4745949:4756158475615847573661209Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-37156
NC_009792:3225965:3233564323356432347661203Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-37155
NC_012779:1449500:1455981145598114572251245Edwardsiella ictaluri 93-146, complete genometype II restriction enzyme3e-35149
NC_010322:5293652:5304732530473253061261395Pseudomonas putida GB-1 chromosome, complete genomerestriction endonuclease EcoRII3e-1583.6