Pre_GI: BLASTP Hits

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Query: NC_002516:1474000:1486960 Pseudomonas aeruginosa PAO1, complete genome

Start: 1486960, End: 1489095, Length: 2136

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012796:2090000:2099374209937421014372064Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-108392
NC_017030:4146937:4158009415800941601772169Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein5e-83309
NC_011883:2680380:2690030269003026921382109Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein2e-82307
NC_010501:2511887:2535693253569325378552163Pseudomonas putida W619, complete genomehypothetical protein4e-78293
NC_007651:72952:1071661071661093252160Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein7e-74279
NC_006138:432000:4433824433824455082127Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-71271
NC_015943:171500:1841881841881863502163Haloarcula hispanica ATCC 33960 chromosome chromosome II, completeDNA/RNA helicase, superfamily I2e-68261
NC_008344:2374761:2396574239657423987542181Nitrosomonas eutropha C91, complete genomehypothetical protein1e-56222
NC_019978:1066000:1066587106658710691782592Halobacteroides halobius DSM 5150, complete genomeDNA/RNA helicase, superfamily I5e-50199
NC_015381:2109500:2118913211891321209312019Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative ATP-dependent helicase5e-21103
NC_010939:1986263:2015298201529820173612064Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative helicase1e-20102
NC_008700:3927896:3932542393254239345301989Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein1e-1999
NC_011830:4234392:4256074425607442581072034Desulfitobacterium hafniense DCB-2, complete genomeputative ATP-dependent helicase5e-1996.7
NC_004347:791897:7974217974217994091989Shewanella oneidensis MR-1, complete genomehypothetical protein7e-1789.7
NC_013061:2288134:2312458231245823144461989Pedobacter heparinus DSM 2366, complete genomeputative ATP-dependent helicase2e-1688.2
NC_008767:927810:9397489397489418022055Neisseria meningitidis FAM18, complete genomeputative ATP-dependent helicase2e-1584.7
NC_011083:2847318:2882926288292628849081983Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative DNA/RNA helicase3e-1584
NC_003197:2894344:2908420290842029104021983Salmonella typhimurium LT2, complete genomeputative DNA/RNA helicase3e-1584
NC_016810:2871689:2930996293099629329781983Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA/RNA helicase3e-1584
NC_016856:2896630:2928655292865529306371983Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA/RNA helicase3e-1584
NC_016857:2871689:2930996293099629329781983Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative DNA/RNA helicase3e-1584
NC_016860:2917910:2931986293198629339681983Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA/RNA helicase3e-1584
NC_016863:2844883:2876908287690828788901983Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA/RNA helicase3e-1584
NC_017046:2896651:2929737292973729317191983Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA/RNA helicase3e-1584
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein4e-0963.9
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein8e-0859.7
NC_013757:3897413:3909839390983939120972259Geodermatophilus obscurus DSM 43160, complete genomeUvrD/REP helicase4e-0757.4
NC_007645:5801295:5823205582320558252322028Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase7e-0756.6