Pre_GI: BLASTP Hits

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Query: NC_001264:28266:28266 Deinococcus radiodurans R1 chromosome 2, complete sequence

Start: 28266, End: 29744, Length: 1479

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009616:183772:2000592000592013301272Thermosipho melanesiensis BI429 chromosome, complete genomelysine 2,3-aminomutase YodO family protein1e-125450
NC_009718:203998:2111952111952124631269Fervidobacterium nodosum Rt17-B1, complete genomelysine 2,3-aminomutase YodO family protein1e-123443
NC_010718:1959517:1976279197627919775411263Natranaerobius thermophilus JW/NM-WN-LF, complete genomeL-lysine 2,3-aminomutase2e-122439
NC_016751:469289:4781204781204794091290Marinitoga piezophila KA3 chromosome, complete genomelysine-2,3-aminomutase3e-121435
NC_010003:1126800:1153851115385111551611311Petrotoga mobilis SJ95, complete genomelysine 2,3-aminomutase YodO family protein1e-119430
NC_021184:1729867:1742716174271617439901275Desulfotomaculum gibsoniae DSM 7213, complete genomelysine-2,3-aminomutase7e-118424
NC_003454:339345:3572533572533585301278Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLysine 2,3-aminomutase6e-117421
NC_015160:3749636:3768002376800237692521251Odoribacter splanchnicus DSM 20712 chromosome, complete genomelysine-2,3-aminomutase3e-114412
NC_005791:837505:8522378522378535381302Methanococcus maripaludis S2, complete genomeLysine 2,3-aminomutase2e-105383
NC_009975:1682000:1686208168620816875091302Methanococcus maripaludis C6, complete genomelysine 2,3-aminomutase YodO family protein2e-105383
NC_012108:442493:4458724458724471821311Desulfobacterium autotrophicum HRM2, complete genomeKamA13e-105382
NC_013665:1922000:1924466192446619257731308Methanocella paludicola SANAE, complete genomeL-lysine 2,3-aminomutase4e-105382
NC_015847:909938:9246419246419259421302Methanococcus maripaludis XI chromosome, complete genomelysine 2,3-aminomutase YodO family protein4e-104379
NC_009051:165102:1954941954941968071314Methanoculleus marisnigri JR1, complete genomelysine 2,3-aminomutase YodO family protein8e-103374
NC_009483:2489000:2505548250554825065911044Geobacter uraniireducens Rf4 chromosome, complete genomelysine 2,3-aminomutase YodO family protein8e-86318
NC_015565:1647554:1659495165949516607631269Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completelysine 2,3-aminomutase YodO family protein4e-85315
NC_011979:3045952:3050947305094730519901044Geobacter sp. FRC-32, complete genomelysine 2,3-aminomutase YodO family protein5e-84312
NC_010730:813534:8358468358468369701125Sulfurihydrogenibium sp. YO3AOP1, complete genomelysine 2,3-aminomutase YodO family protein9e-79294
NC_010814:2217153:2243010224301022440351026Geobacter lovleyi SZ, complete genomelysine 2,3-aminomutase YodO family protein2e-75283
NC_012438:50845:5888658886600101125Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeL-lysine 2,3-aminomutase (KAM) (LAM)4e-72272
NC_003062:2506959:2528746252874625298371092Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein4e-64246
NC_003304:2507000:2528859252885925299501092Agrobacterium tumefaciens str. C58 chromosome circular, completeL-lysine 2,3-aminomutase4e-64246
NC_014834:3130715:3187214318721431883051092Rhodopseudomonas palustris DX-1 chromosome, complete genomelysine 2,3-aminomutase YodO family protein5e-64245
NC_006677:215466:2494092494092504791071Gluconobacter oxydans 621H, complete genomeLysine 2,3-aminomutase2e-63243
NC_015183:2483653:2508875250887525099391065Agrobacterium sp. H13-3 chromosome, complete genomeL-lysine 2,3-aminomutase1e-62240
NC_013165:1407000:1409795140979514110181224Slackia heliotrinireducens DSM 20476, complete genomeKamA family protein7e-49195
NC_013939:1841890:1866512186651218680711560Deferribacter desulfuricans SSM1, complete genomelysine 2,3-aminomutase7e-48192
NC_004545:15650:2194421944229661023Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeputative aminomutase3e-47189
NC_014650:1763308:1781132178113217822681137Geobacillus sp. Y4.1MC1 chromosome, complete genomelysine 2,3-aminomutase YodO family protein6e-46185
NC_015660:1784553:1802351180235118034871137Geobacillus thermoglucosidasius C56-YS93 chromosome, completelysine 2,3-aminomutase YodO family protein6e-46185
NC_007712:532500:5541965541965552241029Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-45184
NC_020181:3518396:352217935221793523144966Enterobacter aerogenes EA1509E, complete genomeLysine 2,3-aminomutase4e-45182
NC_015663:1934863:1948051194805119490821032Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative lysine aminomutase4e-45182
NC_016612:1840325:1857915185791518589431029Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative lysine aminomutase1e-43177
NC_011745:4862218:4892964489296448939921029Escherichia coli ED1a chromosome, complete genomeputative lysine aminomutase2e-43177
NC_011283:5170683:5173671517367151746991029Klebsiella pneumoniae 342 chromosome, complete genomeKamA family protein3e-42173
NC_013850:4993307:4997039499703949980671029Klebsiella variicola At-22 chromosome, complete genomelysine 2,3-aminomutase YodO family protein3e-42173
NC_016845:411844:429849429849430811963Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative aminomutase5e-42172
NC_009648:4958500:4976215497621549772431029Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative aminomutase4e-42172
NC_008601:753221:777263777263778249987Francisella tularensis subsp. novicida U112, complete genomeaminomutase9e-42171
NC_005773:5149768:5193347519334751945041158Pseudomonas syringae pv. phaseolicola 1448A, complete genomearginine aminomutase, putative3e-37156
NC_015635:932240:9496889496889510731386Microlunatus phosphovorus NM-1, complete genomeL-lysine 2,3-aminomutase2e-36154
NC_008061:2368517:2376826237682623780161191Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceProtein of unknown function DUF1604e-35149
NC_008543:2871747:2888966288896628901561191Burkholderia cenocepacia HI2424 chromosome 2, complete sequencelysine 2,3-aminomutase YodO family protein4e-35149
NC_014318:5183975:5204581520458152059511371Amycolatopsis mediterranei U32 chromosome, complete genomelysine 2,3-aminomutase4e-34146
NC_017186:5184000:5204615520461552059851371Amycolatopsis mediterranei S699 chromosome, complete genomeLysine 2,3-aminomutase4e-34146
NC_009953:2727669:2735513273551327369161404Salinispora arenicola CNS-205 chromosome, complete genomelysine 2,3-aminomutase3e-31136
NC_009380:2548878:2555605255560525570801476Salinispora tropica CNB-440 chromosome, complete genomeradical SAM domain-containing protein4e-31136
NC_015434:3507059:3513262351326235146651404Verrucosispora maris AB-18-032 chromosome, complete genomeLysine 2,3-aminomutase4e-31136
NC_013156:226215:2402322402322420941863Methanocaldococcus fervens AG86, complete genomelysine 2,3-aminomutase YodO family protein3e-29130
NC_009464:379377:3793773793773812781902Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein1e-25118
NC_013440:8405719:8429158842915884305341377Haliangium ochraceum DSM 14365, complete genomeradical SAM domain-containing protein8e-23108
NC_014122:143446:1466571466571484261770Methanocaldococcus infernus ME chromosome, complete genomelysine 2,3-aminomutase YodO family protein4e-22106
NC_021150:4201965:4217179421717942184801302Azotobacter vinelandii CA6, complete genomeLysine 2,3-aminomutase7e-21102
NC_012560:4201969:4217183421718342184841302Azotobacter vinelandii DJ, complete genomeLysine 2,3-aminomutase7e-21102
NC_013960:1808523:1808523180852318098631341Nitrosococcus halophilus Nc4 chromosome, complete genomeL-lysine 2,3-aminomutase, putative3e-20100
NC_009380:3117970:3141398314139831427441347Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein7e-1892.4
NC_009614:3476000:3476079347607934781902112Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein7e-1582.4
NC_016633:1898234:1910349191034919124812133Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomelysine 2,3-aminomutase2e-1377.4
NC_009615:711125:7136477136477157612115Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein4e-1170.1