Pre_GI: BLASTP Hits

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Query: NC_001263:531188:531188 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 531188, End: 533863, Length: 2676

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020054:4161049:4182495418249541841261632Fibrella aestuarina BUZ 2 drat genomehypothetical protein2e-33144
NC_013722:2150882:2178543217854321806332091Xanthomonas albilineans, complete genomehypothetical protein3e-33144
NC_003317:1719546:1739125173912517406541530Brucella melitensis 16M chromosome I, complete sequenceHypothetical Membrane Spanning Protein5e-29130
NC_016795:9384:2931629316304791164Brucella abortus A13334 chromosome 1, complete sequencehypothetical protein2e-25118
NC_006512:728281:7390837390837407261644Idiomarina loihiensis L2TR, complete genomehypothetical protein6e-25117
NC_017986:4091051:4104012410401241067712760Pseudomonas putida ND6 chromosome, complete genomebifunctional DNA primase/polymerase3e-1998.2
NC_015733:1943385:1955962195596219572421281Pseudomonas putida S16 chromosome, complete genome5e-1894
NC_012846:986877:100323910032391003613375Bartonella grahamii as4aup, complete genomehypothetical membrane spanning protein2e-1792
NC_010322:1336231:1349044134904413518062763Pseudomonas putida GB-1 chromosome, complete genomebifunctional DNA primase/polymerase6e-1480.1
NC_009662:1329788:1334364133436413359591596Nitratiruptor sp. SB155-2, complete genomehypothetical protein5e-1377.4
NC_008340:682469:6892546892546918002547Alkalilimnicola ehrlichei MLHE-1, complete genomehypothetical protein3e-1274.7
NC_012846:1708840:170924017092401709500261Bartonella grahamii as4aup, complete genome5e-1273.9