Pre_GI: BLASTP Hits

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Query: NC_001263:132288:133766 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 133766, End: 134743, Length: 978

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016816:792460:821028821028821918891Pantoea ananatis LMG 5342, complete genomemultidrug ABC transporter permease5e-23108
NC_011741:1625535:163721616372161638115900Escherichia coli IAI1 chromosome, complete genomeO-acetylserine/cysteine export protein7e-23108
CU928160:1625535:163721616372161638115900Escherichia coli IAI1 chromosome, complete genomecysteine and O-acetyl-L-serine efflux system7e-23108
NC_012559:1635922:164728916472891648176888Laribacter hongkongensis HLHK9, complete genomeprobable transmembrane protein, DMT superfamily3e-21102
NC_009778:1717458:174591617459161746812897Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-20100
NC_009800:1632585:164330516433051644204900Escherichia coli HS, complete genometransporter, 10 TMS drug/metabolite exporter (DME) family3e-2099.4
NC_011415:1715644:172732517273251728224900Escherichia coli SE11 chromosome, complete genomeO-acetylserine/cysteine export protein3e-2099.4
NC_016902:2361628:236578223657822366681900Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-2099
CP002185:1727493:173917417391741740073900Escherichia coli W, complete genomecysteine and O-acetyl-L-serine efflux system4e-2099
CP002516:2361628:236578223657822366681900Escherichia coli KO11, complete genomeprotein of unknown function DUF6 transmembrane4e-2099
NC_010498:1615980:162174816217481622647900Escherichia coli SMS-3-5, complete genomedrug/metabolite exporter family transporter9e-2097.8
NC_008563:1651270:166442616644261665346921Escherichia coli APEC O1, complete genomeprobable amino acid metabolite efflux pump1e-1997.8
NC_015224:3892972:391250739125073913406900Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-1997.4
NC_019673:7797666:780941578094157810386972Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1995.5
NC_009654:4716417:472292247229224723818897Marinomonas sp. MWYL1, complete genomehypothetical protein6e-1995.1
NC_014828:1632000:163987016398701640805936Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function DUF6 transmembrane6e-1995.1
NC_014618:2423661:242879924287992429698900Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-1892
NC_009138:467268:506325506325507218894Herminiimonas arsenicoxydans, complete genomeputative amino acid metabolite efflux pump8e-1581.3
NC_007908:1108494:115495111549511155853903Rhodoferax ferrireducens T118, complete genomeprotein of unknown function DUF6, transmembrane4e-1479
NC_007969:1664500:168324616832461684202957Psychrobacter cryohalolentis K5, complete genomeprotein of unknown function DUF6, transmembrane1e-1377.4
NC_013956:3641368:364284736428473643467621Pantoea ananatis LMG 20103 chromosome, complete genomeEamA2e-1273.6
NC_007954:334795:339732339732340553822Shewanella denitrificans OS217, complete genomeprotein of unknown function DUF6, transmembrane1e-1067.4
NC_014540:1835493:184544818454481846350903Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein6e-0962
NC_016816:2782373:278598127859812786844864Pantoea ananatis LMG 5342, complete genomepermease of the drug/metabolite transporter (DMT) superfamily5e-0858.5