Pre_GI: BLASTP Hits

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Query: CP002185:4750571:4760420 Escherichia coli W, complete genome

Start: 4760420, End: 4761487, Length: 1068

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:4236680:4251283425128342524491167Escherichia coli KO11FL chromosome, complete genomerestriction modification system DNA specificity domain-containing protein0727
CP002516:4236680:4251283425128342524491167Escherichia coli KO11, complete genomerestriction modification system DNA specificity domain protein0727
NC_008577:2402165:2425817242581724269921176Shewanella sp. ANA-3 chromosome 1, complete sequencerestriction modification system DNA specificity domain2e-57223
NC_015216:1102837:1118283111828311194941212Methanobacterium sp. AL-21 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-51201
NC_008358:2638245:2693495269349526946401146Hyphomonas neptunium ATCC 15444, complete genometype I restriction-modification system, S subunit6e-45181
NC_011146:4070000:4081856408185640830431188Geobacter bemidjiensis Bem, complete genomerestriction modification system DNA specificity domain2e-36153
NC_011083:4547825:4598267459826745994091143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,restriction modification system DNA specificity domain8e-33141
NC_012962:4591295:4596402459640245975351134Photorhabdus asymbiotica, complete genometype i restriction enzyme ecobi specificity protein (s protein (s.ecobi)1e-32140
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain7e-32138
NC_014640:6815264:6824393682439368255951203Achromobacter xylosoxidans A8 chromosome, complete genometype I restriction enzyme StySPI specificity protein3e-29129
NC_016612:2009927:2032911203291120339721062Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction enzyme StySPI specificity protein2e-28126
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit1e-27124
NC_008312:3728329:3735023373502337362311209Trichodesmium erythraeum IMS101, complete genomerestriction modification system DNA specificity domain1e-27124
NC_012691:1250385:1256400125640012575151116Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein4e-26119
NC_015259:734795:7492687492687504401173Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative Restriction modification system, type I hsdS5e-26119
NC_012778:1573847:1588985158898515902351251Eubacterium eligens ATCC 27750, complete genometype I restriction enzyme4e-25115
NC_020211:554736:5721105721105732821173Serratia marcescens WW4, complete genomerestriction modification system DNA specificity subunit6e-25115
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit1e-24114
NC_012917:3241196:3252422325242232535941173Pectobacterium carotovorum subsp. carotovorum PC1, complete genomerestriction modification system DNA specificity domain protein9e-25114
NC_011745:2209288:2218310221831022198751566Escherichia coli ED1a chromosome, complete genomeputative type I restriction modification system protein5e-24112
NC_015740:141910:1526751526751538201146Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeType I restriction modification DNA specificity domain-containing protein1e-22107
NC_016593:416661:4224874224874236651179Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein6e-22105
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit4e-22105
NC_012440:1215838:1228897122889712302431347Persephonella marina EX-H1, complete genometype I restriction-modification system specificty subunit1e-21104
NC_011071:1178423:1189714118971411908081095Stenotrophomonas maltophilia R551-3, complete genomerestriction modification system DNA specificity domain3e-21102
NC_006361:2920028:2925616292561629268001185Nocardia farcinica IFM 10152, complete genomeputative restriction-modification system specificity determinant4e-21102
NC_017068:2055500:2066538206653820676681131Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system specificity subunit1e-1997.8
NC_016631:3917253:3956143395614339576421500Granulicella mallensis MP5ACTX8 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1893.2
NC_011138:3881446:3898916389891638999981083Alteromonas macleodii 'Deep ecotype', complete genometype I site-specific deoxyribonuclease6e-1788.6
NC_015953:3227000:3236026323602632372041179Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1788.2
NC_016803:1646342:1659768165976816613661599Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-1788.2
NC_008786:3915000:392564039256403926032393Verminephrobacter eiseniae EF01-2, complete genome4e-1685.9
NC_016887:3286436:3326449332644933275851137Nocardia cyriacigeorgica GUH-2, complete genomeType I restriction-modification enzyme S subunit, specificity-determinant9e-1684.7
NC_019897:3613830:3634225363422536353971173Thermobacillus composti KWC4 chromosome, complete genomerestriction endonuclease S subunit1e-1584.3
NC_013720:5769910:5786880578688057884331554Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity subunit2e-1583.6
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS2e-1583.2
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR2e-1583.2
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein4e-1582.8
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain3e-1479.7
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-1478.6
NC_015578:3495034:3501621350162135027361116Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system S subunit3e-1376.3
NC_007645:5160133:5182397518239751836171221Hahella chejuensis KCTC 2396, complete genomeRestriction endonuclease S subunit4e-1376.3
NC_006510:372826:3786463786463796861041Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system S subunit5e-1375.9
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein4e-1375.9
NC_015737:449914:4612094612094623541146Clostridium sp. SY8519, complete genomehypothetical protein6e-1375.1
NC_014934:244587:2445872445872461101524Cellulophaga algicola DSM 14237 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1274.3
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein2e-1273.6
NC_015945:1908895:1919789191978919209491161Muricauda ruestringensis DSM 13258 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1273.2
NC_008346:584305:609301609301610092792Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system (specificity subunit)3e-1273.2
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1272.4
NC_009077:2308634:2321856232185623232111356Mycobacterium sp. JLS, complete genomerestriction modification system DNA specificity domain8e-1168.2
NC_015125:1668780:1680807168080716819851179Microbacterium testaceum StLB037, complete genomerestriction endonuclease S subunits1e-1067.8
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1067.8
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS22e-1067.4
NC_015578:3495034:350381135038113504440630Treponema primitia ZAS-2 chromosome, complete genometype I site-specific deoxyribonuclease2e-1066.6
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1065.9
NC_015953:2349503:2376073237607323773111239Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-1065.9
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit7e-1065.1
NC_014206:411143:4175314175314187451215Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.7
NC_007164:1434305:1473658147365814748811224Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, specificity subunit1e-0964.3
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S1e-0964.3
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein1e-0964.3
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0963.2
NC_013716:3512950:3521977352197735235931617Citrobacter rodentium ICC168, complete genomeputative type I restriction modification system HsdS component1e-0861.2
NC_014220:1162948:1167996116799611692641269Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-0860.8
NC_009943:1499111:1505694150569415097824089Candidatus Desulfococcus oleovorans Hxd3, complete genomeN-6 DNA methylase1e-0860.8
NC_012669:549500:5588755588755601011227Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein1e-0860.8
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-0860.1
NC_012968:239476:2505692505692517621194Methylotenera mobilis JLW8, complete genomerestriction modification system DNA specificity domain protein3e-0860.1
NC_018721:3155579:3166677316667731679571281Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit S HsdS3e-0859.7
NC_019771:3237000:3256940325694032582681329Anabaena cylindrica PCC 7122, complete genomerestriction modification system DNA specificity domain protein7e-0858.5
NC_014643:2056280:2064525206452520656281104Rothia dentocariosa ATCC 17931 chromosome, complete genometype I restriction modification enzyme protein S2e-0757.4
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0757.4
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS1e-0757.4
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein3e-0756.6
NC_016629:3789554:3799536379953638008641329Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction modification system DNA specificity domain-containing protein4e-0756.2
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein4e-0755.8
NC_013410:1651000:1662625166262516638511227Fibrobacter succinogenes subsp. succinogenes S85 chromosome,restriction modification system DNA specificity domain-containing protein5e-0755.5
NC_013203:202008:2370032370032381631161Atopobium parvulum DSM 20469, complete genomerestriction modification system DNA specificity domain protein1e-0654.3
NC_019908:463281:4689914689914700131023Brachyspira pilosicoli P43/6/78 chromosome, complete genomerestriction endonuclease type I S subunit2e-0653.9
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0653.5
NC_016830:5994494:6005173600517360065461374Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, specificity subunit S3e-0653.1
NC_008786:3915000:392474739247473925637891Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain3e-0653.1
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant3e-0653.1
NC_016047:2480921:2491021249102124922981278Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification enzyme, S subunit5e-0652.4
NC_018607:1505908:1518405151840515196521248Brachyspira pilosicoli B2904 chromosome, complete genometype I restriction-modification enzyme S subunit5e-0652.4
NC_015703:3880903:3901289390128939026681380Runella slithyformis DSM 19594 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-0652