Pre_GI: BLASTP Hits

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Query: AC_000091:1191353:1211923 Escherichia coli W3110 DNA, complete genome

Start: 1211923, End: 1212756, Length: 834

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000913:1188999:120956912095691210402834Escherichia coli K12, complete genomee14 prophage; 5-methylcytosine-specific restriction endonuclease B3e-163574
NC_010002:3465509:347135734713573472349993Delftia acidovorans SPH-1, complete genomeHNH endonuclease5e-30131
NC_012660:5242392:525473652547365255449714Pseudomonas fluorescens SBW25 chromosome, complete genomeputative 5-methylcytosine-specific restriction enzyme4e-29128
NC_006138:2288261:231215223121522312865714Desulfotalea psychrophila LSv54, complete genome5-methylcytosine-specific restriction enzyme A1e-27123
NC_017098:986428:995168995168995860693Spirochaeta africana DSM 8902 chromosome, complete genomeputative restriction endonuclease4e-27122
NC_019974:1184871:1248465124846512498831419Natronococcus occultus SP4, complete genomeputative restriction endonuclease3e-2099.4
NC_014253:312354:3248563248563262831428Methanohalobium evestigatum Z-7303 chromosome, complete genomeHNH endonuclease5e-1995.1
NC_008826:13393:283812838129043663Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein8e-1994.4
NC_014965:2200974:221588722158872216594708Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHNH endonuclease6e-1891.7
NC_009337:89631:991649916499832669Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeHNH endonuclease1e-1790.5
NC_011146:3206000:321961232196123220313702Geobacter bemidjiensis Bem, complete genomeHNH endonuclease2e-1789.7
NC_015410:1202370:121125612112561211990735Pseudomonas mendocina NK-01 chromosome, complete genomeputative restriction endonuclease7e-1787.8
NC_008358:2638245:2681872268187226829031032Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein4e-1478.6
NC_020211:554736:5795815795815806991119Serratia marcescens WW4, complete genomehypothetical protein8e-1374.3
NC_010571:1334000:133977913397791340618840Opitutus terrae PB90-1, complete genomeHNH endonuclease3e-1169.3
NC_007492:5214709:522843452284345229405972Pseudomonas fluorescens PfO-1, complete genomeHNH endonuclease7e-1064.7
NC_003888:5042283:5052984505298450546661683Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0964.3
NC_018080:2288700:230470923047092305695987Pseudomonas aeruginosa DK2 chromosome, complete genomeHNH endonuclease typeIV restriction enzyme2e-0963.2
NC_008313:1:2243622436235511116Ralstonia eutropha H16 chromosome 1, complete sequencepredicted restriction endonuclease1e-0860.5
NC_013521:302574:3175943175943187811188Sanguibacter keddieii DSM 10542, complete genomeHNH endonuclease6e-0858.2
NC_014931:724102:7473827473827485361155Variovorax paradoxus EPS chromosome, complete genomeHNH endonuclease1e-0757.4
NC_012491:3736167:3752780375278037538621083Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-0755.5
NC_009725:692237:7067247067247078901167Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-0652