Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_010513:542312 Xylella fastidiosa M12 chromosome, complete genome

D: 42.0784

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_020304:1977249Desulfocapsa sulfexigens DSM 10523, complete genomeSubject Query27.3468
NC_016940:421819Saprospira grandis str. Lewin chromosome, complete genomeSubject Query27.6325
NC_021175:2063611*Streptococcus oligofermentans AS 1.3089, complete genomeSubject Query28.6301
NC_016940:4326000*Saprospira grandis str. Lewin chromosome, complete genomeSubject Query29.1869
NC_016940:822892*Saprospira grandis str. Lewin chromosome, complete genomeSubject Query29.3106
NC_020300:646500*Bartonella australis Aust/NH1, complete genomeSubject Query29.3818
NC_014650:1763308Geobacillus sp. Y4.1MC1 chromosome, complete genomeSubject Query30.6564
NC_016940:271500*Saprospira grandis str. Lewin chromosome, complete genomeSubject Query30.9369
NC_016940:3632974Saprospira grandis str. Lewin chromosome, complete genomeSubject Query31.0311
NC_013960:1319349Nitrosococcus halophilus Nc4 chromosome, complete genomeSubject Query31.0737
NC_016940:190986*Saprospira grandis str. Lewin chromosome, complete genomeSubject Query31.577
NC_016940:2974396Saprospira grandis str. Lewin chromosome, complete genomeSubject Query31.6738
NC_010161:1501758*Bartonella tribocorum CIP 105476, complete genomeSubject Query31.9674
NC_020300:1274581Bartonella australis Aust/NH1, complete genomeSubject ←→ Query32.5511
NC_013960:2662458Nitrosococcus halophilus Nc4 chromosome, complete genomeSubject ←→ Query33.751
NC_016940:995500Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query35.1032
NC_007645:1033834*Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query35.5123
NC_007484:130896Nitrosococcus oceani ATCC 19707, complete genomeSubject ←→ Query35.6153
NC_014315:114151Nitrosococcus watsoni C-113 chromosome, complete genomeSubject ←→ Query36.9613
NC_014315:3004125Nitrosococcus watsoni C-113 chromosome, complete genomeSubject ←→ Query38.6036
NC_020409:2856481Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSubject ←→ Query40.1284
NC_010513:542312*Xylella fastidiosa M12 chromosome, complete genomeSubject ←→ Query42.0784
NC_007645:6500059*Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query42.9688
NC_007645:2408125*Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query44.4654
NC_007645:2779381*Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query45.1313
NC_007645:5397526Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query49.0258