Pre_GI: OUP Neighbours

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Query: NC_007517:1998342 Geobacter metallireducens GS-15, complete genome

D: 30.8244

Host Lineage: Geobacter metallireducens; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: First isolated from the Potomac river downstream of Washington, DC, USA in 1987. This organism actively moves towards metal attractants such as iron and manganese oxides, which are insoluble, and produces type IV pili for attachment to the insoluble substrates. Common metal-reducing bacterium. This organism, similar to what is observed in Geobacteria sulfurreducens, couples the oxidation of organic molecules to the reduction of iron by using insoluble Fe (III) as an electron acceptor under anaerobic conditions. This bacterium plays an imporant part of the nutrient cycling in aquatic environments. The cell can also use uranium and plutonium, therefore, this organism and may be important for the bioremediation of contaminated waste sites.

Number of Neighbours: 56




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014098:3008951*Bacillus tusciae DSM 2912 chromosome, complete genome75.576 %Subject ←→ Query30.6319
NC_010424:697187Candidatus Desulforudis audaxviator MP104C, complete genome76.5135 %Subject ←→ Query29.5704
NC_010424:14657*Candidatus Desulforudis audaxviator MP104C, complete genome75.4197 %Subject ←→ Query34.1701
NC_002932:2142000*Chlorobium tepidum TLS, complete genome75.5637 %Subject ←→ Query30.1556
NC_002932:937157Chlorobium tepidum TLS, complete genome75.4136 %Subject ←→ Query33.2928
NC_002932:296557*Chlorobium tepidum TLS, complete genome75.9467 %Subject ←→ Query27.8605
NC_007298:778723Dechloromonas aromatica RCB, complete genome75.7138 %Subject ←→ Query27.8158
NC_007298:1418500*Dechloromonas aromatica RCB, complete genome77.0558 %Subject ←→ Query29.1305
NC_014972:2980974*Desulfobulbus propionicus DSM 2032 chromosome, complete genome78.0852 %Subject ←→ Query31.5205
NC_014972:2328228Desulfobulbus propionicus DSM 2032 chromosome, complete genome75.5086 %Subject ←→ Query37.6789
NC_014972:1621850*Desulfobulbus propionicus DSM 2032 chromosome, complete genome76.8352 %Subject ←→ Query31.7436
NC_014844:442380*Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome75.7047 %Subject ←→ Query39.2358
NC_014216:2334568Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome75.8793 %Subject ←→ Query28.9225
NC_014366:3555425Gamma proteobacterium HdN1, complete genome75.0613 %Subject ←→ Query31.2804
NC_011146:482440*Geobacter bemidjiensis Bem, complete genome78.992 %Subject ← Query43.6501
NC_010814:155834*Geobacter lovleyi SZ, complete genome77.8523 %Subject ←→ Query32.8003
NC_007517:2451547Geobacter metallireducens GS-15, complete genome76.7065 %Subject ← Query44.1695
NC_007517:3524715Geobacter metallireducens GS-15, complete genome77.4265 %Subject ← Query47.0731
NC_007517:2342607Geobacter metallireducens GS-15, complete genome80.193 %Subject ←→ Query40.4567
NC_007517:306508Geobacter metallireducens GS-15, complete genome78.6305 %Subject ←→ Query33.7886
NC_007517:2241104Geobacter metallireducens GS-15, complete genome80.625 %Subject ← Query42.1264
NC_007517:2870657Geobacter metallireducens GS-15, complete genome78.0362 %Subject ←→ Query30.9339
NC_007517:2055305*Geobacter metallireducens GS-15, complete genome76.9945 %Subject ←→ Query33.5061
NC_007517:2820909Geobacter metallireducens GS-15, complete genome76.9761 %Subject ←→ Query31.3929
NC_007517:1792000*Geobacter metallireducens GS-15, complete genome76.9516 %Subject ←→ Query31.934
NC_007517:2632233*Geobacter metallireducens GS-15, complete genome75.8578 %Subject ←→ Query30.6724
NC_007517:1561466*Geobacter metallireducens GS-15, complete genome76.9179 %Subject ← Query43.7838
NC_007517:2564361Geobacter metallireducens GS-15, complete genome79.277 %Subject ←→ Query30.6025
NC_007517:480303Geobacter metallireducens GS-15, complete genome79.1023 %Subject ←→ Query32.7179
NC_007517:1515493*Geobacter metallireducens GS-15, complete genome79.5895 %Subject ←→ Query30.9545
NC_011979:589874Geobacter sp. FRC-32, complete genome75.0031 %Subject ←→ Query31.1892
NC_014973:2894248Geobacter sp. M18 chromosome, complete genome79.8131 %Subject ←→ Query29.0035
NC_014973:2693672Geobacter sp. M18 chromosome, complete genome76.0325 %Subject ←→ Query29.3562
NC_014973:1136794Geobacter sp. M18 chromosome, complete genome76.1244 %Subject ←→ Query37.9515
NC_014973:5099543Geobacter sp. M18 chromosome, complete genome76.4706 %Subject ← Query41.7055
NC_014973:3414459*Geobacter sp. M18 chromosome, complete genome75.7567 %Subject ←→ Query31.3866
NC_014973:3290545*Geobacter sp. M18 chromosome, complete genome76.8444 %Subject ← Query48.6426
NC_002939:2337402*Geobacter sulfurreducens PCA, complete genome81.2776 %Subject ←→ Query28.7239
NC_002939:2124642Geobacter sulfurreducens PCA, complete genome75.144 %Subject ←→ Query35.2655
NC_002939:1926084*Geobacter sulfurreducens PCA, complete genome76.8995 %Subject ←→ Query29.5811
NC_002939:1634843*Geobacter sulfurreducens PCA, complete genome78.1648 %Subject ← Query40.9168
NC_008740:1635137*Marinobacter aquaeolei VT8, complete genome76.1091 %Subject ←→ Query33.7253
NC_010794:303203*Methylacidiphilum infernorum V4, complete genome76.0846 %Subject ← Query46.5936
NC_013960:1693643Nitrosococcus halophilus Nc4 chromosome, complete genome75.7935 %Subject ←→ Query30.6955
NC_014315:1744485Nitrosococcus watsoni C-113 chromosome, complete genome75.4381 %Subject ←→ Query36.8859
NC_007498:357484Pelobacter carbinolicus DSM 2380, complete genome76.538 %Subject ← Query43.1192
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome75.4933 %Subject ←→ Query33.6029
NC_008609:2933468Pelobacter propionicus DSM 2379, complete genome78.4283 %Subject ←→ Query34.9039
NC_008609:251608Pelobacter propionicus DSM 2379, complete genome78.9767 %Subject ← Query48.2801
NC_008609:2254392Pelobacter propionicus DSM 2379, complete genome76.9179 %Subject ← Query45.7892
NC_008609:112340*Pelobacter propionicus DSM 2379, complete genome78.0484 %Subject ←→ Query38.4837
NC_007512:944941Pelodictyon luteolum DSM 273, complete genome78.0821 %Subject ←→ Query31.1265
NC_011060:459615Pelodictyon phaeoclathratiforme BU-1, complete genome75.6373 %Subject ←→ Query34.6364
NC_007516:1086948*Synechococcus sp. CC9605, complete genome75.3891 %Subject ← Query48.4699
NC_005070:1588419*Synechococcus sp. WH 8102, complete genome75.8824 %Subject ← Query47.0209
NC_008554:2469156Syntrophobacter fumaroxidans MPOB, complete genome77.4265 %Subject ← Query41.5984