Pre_GI: OUP Neighbours

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Query: NC_006510:1014500 Geobacillus kaustophilus HTA426, complete genome

D: 39.7198

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 73




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014551:442135Bacillus amyloliquefaciens DSM 7, complete genome75.4565 %Subject ←→ Query32.3231
NC_009725:3447336Bacillus amyloliquefaciens FZB42, complete genome75.1072 %Subject ←→ Query35.2991
NC_016023:1839503Bacillus coagulans 36D1 chromosome, complete genome78.125 %Subject → Query27.7663
NC_016023:1538000*Bacillus coagulans 36D1 chromosome, complete genome78.3333 %Subject → Query27.6447
NC_016023:1083826Bacillus coagulans 36D1 chromosome, complete genome76.3051 %Subject ←→ Query36.5698
NC_002570:3911153*Bacillus halodurans C-125, complete genome76.8873 %Subject ←→ Query31.5792
NC_002570:2649759*Bacillus halodurans C-125, complete genome77.2212 %Subject ←→ Query37.3257
NC_002570:1220180Bacillus halodurans C-125, complete genome77.4449 %Subject ←→ Query30.258
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome78.4252 %Subject ←→ Query31.3686
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome78.5018 %Subject ←→ Query32.0525
NC_014828:2038692Ethanoligenens harbinense YUAN-3 chromosome, complete genome75.0888 %Subject ←→ Query39.8666
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome84.3597 %Subject ←→ Query33.0492
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome81.106 %Subject ←→ Query30.262
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome83.0331 %Subject ←→ Query37.0244
NC_006510:1731939*Geobacillus kaustophilus HTA426, complete genome84.6752 %Subject ←→ Query41.4725
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome81.5962 %Subject ←→ Query31.9066
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome82.0925 %Subject ←→ Query31.1681
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome81.3664 %Subject → Query29.4869
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome80.7659 %Subject ←→ Query34.7114
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome83.6244 %Subject ←→ Query36.7248
NC_006510:795973Geobacillus kaustophilus HTA426, complete genome80.1777 %Subject ←→ Query30.7393
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome83.7102 %Subject ←→ Query38.8011
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome81.5717 %Subject ←→ Query31.0693
NC_006510:746814Geobacillus kaustophilus HTA426, complete genome80.6434 %Subject → Query29.7149
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome84.1483 %Subject ←→ Query30.4934
NC_012793:3243727Geobacillus sp. WCH70, complete genome78.704 %Subject ←→ Query33.5494
NC_012793:3035978Geobacillus sp. WCH70, complete genome76.9638 %Subject → Query27.2556
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome80.0551 %Subject ←→ Query33.9451
NC_014915:2900209Geobacillus sp. Y412MC52 chromosome, complete genome76.3756 %Subject ←→ Query34.6121
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome82.0496 %Subject → Query29.3197
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome83.3272 %Subject ←→ Query38.0805
NC_014915:595569Geobacillus sp. Y412MC52 chromosome, complete genome80.6832 %Subject ←→ Query41.0221
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome78.9216 %Subject ←→ Query34.7963
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome84.1054 %Subject ←→ Query32.928
NC_014915:332784Geobacillus sp. Y412MC52 chromosome, complete genome76.057 %Subject ←→ Query35.3478
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome84.8621 %Subject ←→ Query33.7161
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome84.5956 %Subject ←→ Query36.3561
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome86.3909 %Subject ←→ Query36.0595
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome81.5165 %Subject ←→ Query30.3414
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome82.4265 %Subject ←→ Query30.9399
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome82.9167 %Subject ←→ Query36.3336
NC_013411:681907Geobacillus sp. Y412MC61, complete genome77.5337 %Subject ←→ Query30.5897
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome81.5165 %Subject ←→ Query30.6232
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome83.8113 %Subject → Query28.6055
NC_013411:597235Geobacillus sp. Y412MC61, complete genome81.7953 %Subject ←→ Query35.813
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome80.0031 %Subject ←→ Query34.9976
NC_013411:334549Geobacillus sp. Y412MC61, complete genome82.3989 %Subject ←→ Query31.2318
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome81.973 %Subject ←→ Query29.8119
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome83.2751 %Subject ←→ Query35.9085
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome78.5233 %Subject ←→ Query35.4059
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome82.1293 %Subject → Query26.0731
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome75.5178 %Subject → Query29.6612
NC_013411:284461Geobacillus sp. Y412MC61, complete genome84.3627 %Subject ←→ Query36.9212
NC_013411:735838Geobacillus sp. Y412MC61, complete genome80.4534 %Subject ←→ Query34.1271
NC_013411:1454465Geobacillus sp. Y412MC61, complete genome80.8517 %Subject ←→ Query39.8118
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome86.2806 %Subject ←→ Query32.8925
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome78.6091 %Subject ←→ Query48.9344
NC_015873:1193843*Megasphaera elsdenii DSM 20460, complete genome76.4645 %Subject ←→ Query38.0912
NC_015690:3941113*Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.3989 %Subject ←→ Query44.4181
NC_015690:1348691*Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.4626 %Subject ←→ Query35.1991
NC_015690:4361000Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.7788 %Subject ←→ Query40.7943
NC_012914:4238142Paenibacillus sp. JDR-2, complete genome75.6097 %Subject ←→ Query35.0494
NC_012914:2360989Paenibacillus sp. JDR-2, complete genome75.3248 %Subject ←→ Query34.4844
NC_013406:3874157Paenibacillus sp. Y412MC10 chromosome, complete genome77.3713 %Subject ←→ Query34.0467
NC_013406:7092510*Paenibacillus sp. Y412MC10 chromosome, complete genome75.481 %Subject ←→ Query32.5359
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome80.8915 %Subject ←→ Query34.0613
NC_013406:6568273*Paenibacillus sp. Y412MC10 chromosome, complete genome76.0294 %Subject ←→ Query36.8797
NC_013406:347995Paenibacillus sp. Y412MC10 chromosome, complete genome76.5533 %Subject ←→ Query34.3654
NC_013406:5954472Paenibacillus sp. Y412MC10 chromosome, complete genome76.7034 %Subject ←→ Query37.4529
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome78.8817 %Subject ←→ Query41.0068
NC_013406:4023367Paenibacillus sp. Y412MC10 chromosome, complete genome77.8585 %Subject → Query29.6966
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome79.7794 %Subject ←→ Query31.2804
NC_013406:3975512*Paenibacillus sp. Y412MC10 chromosome, complete genome76.0509 %Subject ←→ Query34.1926