Pre_GI: OUP Neighbours

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Query: NC_014976:1174430 Bacillus subtilis BSn5 chromosome, complete genome

D: 43.0512

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Bacillus subtilis BSn5 was isolated from Amorphophallus konjac calli tissue culture. Bacilllus subtilis BSn5 could inhibit Erwinia carotovora subsp. carotovora strain SCG1, which causes Amorphophallus soft rot disease and affects Amorphophallus industry development This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system.The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.

Number of Neighbours: 30




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_016023:1839503Bacillus coagulans 36D1 chromosome, complete genome77.0251 %Subject Query27.7663
NC_011830:3528665Desulfitobacterium hafniense DCB-2, complete genome78.6091 %Subject Query30.3776
NC_007907:1547539*Desulfitobacterium hafniense Y51, complete genome78.0668 %Subject Query30.3846
NC_014551:3515462Bacillus amyloliquefaciens DSM 7, complete genome76.7402 %Subject Query31.3756
NC_011830:4645453*Desulfitobacterium hafniense DCB-2, complete genome75.7996 %Subject Query31.6026
NC_014376:1842290*Clostridium saccharolyticum WM1 chromosome, complete genome75.1287 %Subject Query31.9269
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome76.3174 %Subject Query32.0525
NC_015975:441580*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.7996 %Subject Query32.2212
NC_014551:442135Bacillus amyloliquefaciens DSM 7, complete genome78.6826 %Subject Query32.3231
NC_013406:7092510*Paenibacillus sp. Y412MC10 chromosome, complete genome75.386 %Subject Query32.5359
NC_014219:2491021Bacillus selenitireducens MLS10 chromosome, complete genome75.2574 %Subject ←→ Query33.0881
NC_014376:386650*Clostridium saccharolyticum WM1 chromosome, complete genome76.0601 %Subject ←→ Query33.1125
NC_015520:2974048Mahella australiensis 50-1 BON chromosome, complete genome76.2929 %Subject ←→ Query33.3024
NC_014483:1973233*Paenibacillus polymyxa E681 chromosome, complete genome75.0551 %Subject ←→ Query33.5725
NC_011830:3025437*Desulfitobacterium hafniense DCB-2, complete genome75.3248 %Subject ←→ Query33.8394
NC_007759:291368*Syntrophus aciditrophicus SB, complete genome76.2898 %Subject ←→ Query33.9728
NC_015172:1255956*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.3217 %Subject ←→ Query34.7682
NC_014376:6296*Clostridium saccharolyticum WM1 chromosome, complete genome75.6127 %Subject ←→ Query34.8908
NC_011830:2177187Desulfitobacterium hafniense DCB-2, complete genome77.9596 %Subject ←→ Query35.1804
NC_009725:3447336Bacillus amyloliquefaciens FZB42, complete genome76.8873 %Subject ←→ Query35.2991
NC_011830:633195Desulfitobacterium hafniense DCB-2, complete genome76.5748 %Subject ←→ Query36.126
NC_007907:3872805Desulfitobacterium hafniense Y51, complete genome78.2292 %Subject ←→ Query37.2732
NC_007759:723675*Syntrophus aciditrophicus SB, complete genome77.2151 %Subject ←→ Query38.1115
NC_014976:2231984*Bacillus subtilis BSn5 chromosome, complete genome82.739 %Subject ←→ Query39.042
NC_015385:456000*Treponema succinifaciens DSM 2489 chromosome, complete genome75.239 %Subject ←→ Query39.4503
NC_015690:3941113*Paenibacillus mucilaginosus KNP414 chromosome, complete genome78.1127 %Subject ←→ Query44.4181
NC_010337:2848360*Heliobacterium modesticaldum Ice1, complete genome75.2757 %Subject ←→ Query48.8605
NC_010337:2793667*Heliobacterium modesticaldum Ice1, complete genome75.9314 %Subject ←→ Query50.1502
NC_015690:7785875Paenibacillus mucilaginosus KNP414 chromosome, complete genome77.6961 %Subject ←→ Query51.7482
NC_015690:632565*Paenibacillus mucilaginosus KNP414 chromosome, complete genome76.9669 %Subject Query58.9304