Pre_GI: OUP Neighbours

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Query: NC_013714:2294342 Bifidobacterium dentium Bd1, complete genome

D: 48.7653

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

Number of Neighbours: 11




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010816:1852406Bifidobacterium longum DJO10A, complete genome77.8186 %Subject Query23.1548
NC_010627:532407Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence75.3523 %Subject Query30.1076
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence76.5441 %Subject Query31.3936
NC_004307:1108325Bifidobacterium longum NCC2705, complete genome77.2304 %Subject Query31.6663
NC_012814:1599241Bifidobacterium animalis subsp. lactis Bl-04, complete genome79.4822 %Subject Query32.3379
NC_012815:1603916Bifidobacterium animalis subsp. lactis DSM 10140, complete genome80.9835 %Subject Query32.4976
NC_014218:253558*Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome75.6097 %Subject Query32.6331
NC_009138:1544835Herminiimonas arsenicoxydans, complete genome75.3646 %Subject Query33.0583
NC_009138:1843998*Herminiimonas arsenicoxydans, complete genome75.1042 %Subject Query34.9668
NC_013959:1059004Sideroxydans lithotrophicus ES-1 chromosome, complete genome75.7629 %Subject ←→ Query40.494
NC_013714:1830959*Bifidobacterium dentium Bd1, complete genome75.6464 %Subject ←→ Query47.5233