Pre_GI: OUP Neighbours

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Query: NC_008463:2017607 Pseudomonas aeruginosa UCBPP-PA14, complete genome

D: 39.6255

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

Number of Neighbours: 19




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_007298:778723Dechloromonas aromatica RCB, complete genome78.1342 %Subject Query27.8158
NC_002932:296557*Chlorobium tepidum TLS, complete genome76.6575 %Subject Query27.8605
NC_007512:2024880*Pelodictyon luteolum DSM 273, complete genome76.8689 %Subject Query28.5849
NC_007761:781210*Rhizobium etli CFN 42, complete genome77.6348 %Subject Query28.9946
NC_007298:1418500*Dechloromonas aromatica RCB, complete genome75.1685 %Subject Query29.1305
NC_014355:2775979Candidatus Nitrospira defluvii, complete genome76.9455 %Subject ←→ Query29.6922
NC_015379:1887275*Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,81.3848 %Subject ←→ Query31.0848
NC_005773:4899252Pseudomonas syringae pv. phaseolicola 1448A, complete genome76.492 %Subject ←→ Query31.6748
NC_014008:1463795*Coraliomargarita akajimensis DSM 45221 chromosome, complete genome75.1256 %Subject ←→ Query33.08
NC_002932:937157Chlorobium tepidum TLS, complete genome78.1158 %Subject ←→ Query33.2928
NC_011027:136954*Chlorobaculum parvum NCIB 8327, complete genome75.4565 %Subject ←→ Query33.2989
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome75.72 %Subject ←→ Query33.6029
NC_014394:707305*Gallionella capsiferriformans ES-2 chromosome, complete genome76.0754 %Subject ←→ Query33.8765
NC_002947:4167500Pseudomonas putida KT2440, complete genome76.489 %Subject ←→ Query34.0231
NC_007963:1908964Chromohalobacter salexigens DSM 3043, complete genome80.3278 %Subject ←→ Query39.8841
NC_002939:1634843*Geobacter sulfurreducens PCA, complete genome76.7984 %Subject ←→ Query40.9168
NC_011027:1971580Chlorobaculum parvum NCIB 8327, complete genome75.5178 %Subject ←→ Query41.2828
NC_015410:2144387*Pseudomonas mendocina NK-01 chromosome, complete genome82.5888 %Subject ←→ Query41.6723
NC_007517:1561466*Geobacter metallireducens GS-15, complete genome75.1226 %Subject ←→ Query43.7838