Pre_GI: OUP Neighbours

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Query: NC_004347:4302768 Shewanella oneidensis MR-1, complete genome

D: 46.1729

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

Number of Neighbours: 3




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008260:125500*Alcanivorax borkumensis SK2, complete genome76.1581 %Subject Query30.5751
NC_008700:2607526Shewanella amazonensis SB2B, complete genome75.5423 %Subject Query34.2914
NC_008344:1*Nitrosomonas eutropha C91, complete genome76.0447 %Subject ←→ Query36.7971