Pre_GI: OUP Neighbours

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Query: NC_002505:1550108 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

D: 34.6547

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 7




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence77.0864 %Subject ←→ Query27.8788
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence75.8303 %Subject ←→ Query29.7179
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence77.0711 %Subject ←→ Query30.5138
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence75.2727 %Subject ←→ Query31.6148
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence75.0031 %Subject ←→ Query33.3414
NC_015559:2434000*Marinomonas posidonica IVIA-Po-181 chromosome, complete genome75.5821 %Subject ←→ Query34.7215
NC_010554:2646806Proteus mirabilis HI4320, complete genome77.3652 %Subject ←→ Query35.3988