Pre_GI: OUP MCL Sub Cluster Neighbours

Some Help

Query: NC_020134:2772500 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

D: 27.3127

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

Sub Cluster statistics




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_007503:1486000Carboxydothermus hydrogenoformans Z-2901, complete genomeSubject ←→ Query25.2756
NC_020134:2772500Clostridium stercorarium subsp. stercorarium DSM 8532, completeSubject ←→ Query27.3127
NC_009253:1265474Desulfotomaculum reducens MI-1 chromosome, complete genomeSubject ←→ Query29.0947
NC_016894:3527364Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query29.1005
NC_021184:4524500*Desulfotomaculum gibsoniae DSM 7213, complete genomeSubject ←→ Query30.6755
NC_015520:595532*Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query31.4658
NC_021184:4493440Desulfotomaculum gibsoniae DSM 7213, complete genomeSubject ←→ Query31.671
NC_021184:1*Desulfotomaculum gibsoniae DSM 7213, complete genomeSubject ←→ Query31.7483
NC_015520:2821406Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query32.9861
NC_015520:2280643*Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query33.0691
NC_015520:2567329Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query33.3587
NC_015520:55710*Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query33.5687
NC_014624:2878457Eubacterium limosum KIST612 chromosome, complete genomeSubject ←→ Query33.5816
NC_016894:77853Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query34.0577
NC_015520:3060495Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query34.2391
NC_015520:2612767Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query35.4815
NC_015520:3038770Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query36.2273
NC_015520:1619000Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query36.7887
NC_015520:2859820Mahella australiensis 50-1 BON chromosome, complete genomeSubject ←→ Query37.1839
NC_015520:330500*Mahella australiensis 50-1 BON chromosome, complete genomeSubject Query37.3893
NC_015520:224136*Mahella australiensis 50-1 BON chromosome, complete genomeSubject Query37.9888
NC_015520:1683616Mahella australiensis 50-1 BON chromosome, complete genomeSubject Query42.3664