Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_010161:1501758 Bartonella tribocorum CIP 105476, complete genome

D: 31.9674

Host Lineage: Bartonella tribocorum; Bartonella; Bartonellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism was isolated from the blood of wild rats and from fleas obtained from wild rats. Transmission of these organisms is often through an insect vector. Once in a host, this intracellular pathogen is internalized by an actin-dependent mechanism, and primarily targets endothelial cells, although other cells can be infected. The proliferation of the vascular endothelium (bacillary angiomatosis) is characterisitic of Bartonella infection and results in multiplication of the bacterium's host cells. Infected macrophages are stimulated to release vascular endothelial growth factor (VEGF) and interleukin 1 beta, both of which promote angiogenesis. Endothelial cells are also stimulated to grow and divide by direct contact with bacterial cells. In addition, programmed cell death (apoptosis) of endothelial cells is inhibited, combatting a common mechanism eukaryotic cells use to deal with bacterial infection. Other pathogenicity factors include pili and outer membrane adhesins for attachment to host cells. This organism is genetically related to Bartonella elizabethae which was isolated from a case of endocarditis in a human.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_020304:1977249Desulfocapsa sulfexigens DSM 10523, complete genomeSubject ←→ Query27.3468
NC_016940:421819Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query27.6325
NC_021175:2063611*Streptococcus oligofermentans AS 1.3089, complete genomeSubject ←→ Query28.6301
NC_016940:4326000*Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query29.1869
NC_016940:822892*Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query29.3106
NC_020300:646500*Bartonella australis Aust/NH1, complete genomeSubject ←→ Query29.3818
NC_014650:1763308Geobacillus sp. Y4.1MC1 chromosome, complete genomeSubject ←→ Query30.6564
NC_016940:271500*Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query30.9369
NC_016940:3632974Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query31.0311
NC_013960:1319349Nitrosococcus halophilus Nc4 chromosome, complete genomeSubject ←→ Query31.0737
NC_016940:190986*Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query31.577
NC_016940:2974396Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query31.6738
NC_010161:1501758*Bartonella tribocorum CIP 105476, complete genomeSubject ←→ Query31.9674
NC_020300:1274581Bartonella australis Aust/NH1, complete genomeSubject ←→ Query32.5511
NC_013960:2662458Nitrosococcus halophilus Nc4 chromosome, complete genomeSubject ←→ Query33.751
NC_016940:995500Saprospira grandis str. Lewin chromosome, complete genomeSubject ←→ Query35.1032
NC_007645:1033834*Hahella chejuensis KCTC 2396, complete genomeSubject ←→ Query35.5123
NC_007484:130896Nitrosococcus oceani ATCC 19707, complete genomeSubject ←→ Query35.6153
NC_014315:114151Nitrosococcus watsoni C-113 chromosome, complete genomeSubject ←→ Query36.9613
NC_014315:3004125Nitrosococcus watsoni C-113 chromosome, complete genomeSubject ←→ Query38.6036
NC_020409:2856481Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSubject ←→ Query40.1284
NC_010513:542312*Xylella fastidiosa M12 chromosome, complete genomeSubject Query42.0784
NC_007645:6500059*Hahella chejuensis KCTC 2396, complete genomeSubject Query42.9688
NC_007645:2408125*Hahella chejuensis KCTC 2396, complete genomeSubject Query44.4654
NC_007645:2779381*Hahella chejuensis KCTC 2396, complete genomeSubject Query45.1313
NC_007645:5397526Hahella chejuensis KCTC 2396, complete genomeSubject Query49.0258