Pre_GI Gene

Some Help

Host: NC_014006 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014006:63000 Sphingobium japonicum UT26S chromosome 1, complete genome

Host Lineage: Sphingobium japonicum; Sphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Sphingobium japonicum (strain NBRC 101211 / UT26S) is a yellow-pigmented, non-motile, aerobic, hexachlorocyclohexane (HCH)-degrading Gram-negative bacterium isolated from a dumpsite in the vicinity of an industry that has been producing lindane. HCH has been used extensively as insect control agents in the health and agriculture fields. Sphingobium japonicum, formerly Sphingomonas paucimobilis, is able to degrade hexachlorocyclohexane which has been used extensively as insect control agents in the health and agriculture fields.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6304763874828methylase of polypeptide chain release factorsQuickGO ontologyBLASTP
6397864112135hypothetical proteinBLASTP
6419164973783hypothetical proteinBLASTP
6507765454378acyl-CoA hydrolaseQuickGO ontologyBLASTP
6544765746300hypothetical proteinBLASTP
6582266250429CBS domain proteinQuickGO ontologyBLASTP
66257677501494hypothetical proteinBLASTP
6819169681149116S ribosomal RNAQuickGO ontologyBLASTP
699517002777tRNA-IleQuickGO ontology
700377011276tRNA-AlaQuickGO ontologyBLASTP
7051873311279423S ribosomal RNAQuickGO ontologyBLASTP
73454735711185S ribosomal RNAQuickGO ontologyBLASTP
736357371379tRNA-MetQuickGO ontology
7398874749762hypothetical proteinBLASTP
74915765311617putative amino acid transporterQuickGO ontologyBLASTP
76564778381275putative MFS permeaseQuickGO ontologyBLASTP
7807878374297Sel1-like TPR repeat proteinQuickGO ontologyBLASTP
7843978990552putative transposaseQuickGO ontologyBLASTP
7895979381423putative transposaseQuickGO ontologyBLASTP
79472806051134hypothetical proteinBLASTP
8061081335726glycerophosphoryl diester phosphodiesteraseQuickGO ontologyBLASTP
8131981780462YjgF-family proteinQuickGO ontologyBLASTP
8177782448672hypothetical protein
8244582741297hypothetical protein
8282083182363CheY-like response regulatorQuickGO ontologyBLASTP
8322484021798inositol monophosphatase family proteinQuickGO ontologyBLASTP
84008853541347putative Zn-dependent protease PmbAQuickGO ontologyBLASTP