Pre_GI Gene

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Host: NC_018080 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018080:2288700 Pseudomonas aeruginosa DK2 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
228870022906221923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
22906402291173534translation initiation factor IF-3QuickGO ontologyBLASTP
2291235229142919550S ribosomal protein L35QuickGO ontologyBLASTP
2291453229180935750S ribosomal protein L20QuickGO ontologyBLASTP
229190722929231017phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
229295822953362379phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
22953402295642303integration host factor subunit alphaQuickGO ontologyBLASTP
22956232295979357hypothetical proteinBLASTP
2296069229614577tRNA-ProQuickGO ontologyBLASTP
22977802298088309hypothetical proteinBLASTP
22981152298942828hypothetical proteinBLASTP
22992002299310111ISPpu14 transposase Orf3QuickGO ontologyBLASTP
229949523007541260cytoplasmic proteinQuickGO ontologyBLASTP
23010702301894825hypothetical proteinBLASTP
23019842302823840hypothetical proteinBLASTP
23028242303504681hypothetical proteinBLASTP
23038102304028219hypothetical protein
23047092305695987HNH endonuclease typeIV restriction enzymeQuickGO ontologyBLASTP
23065112307338828hypothetical proteinBLASTP
23073652307673309hypothetical proteinBLASTP
23079122308166255hypothetical protein
23109172311180264hypothetical proteinBLASTP
23111902311549360hypothetical protein
23115782312024447hypothetical proteinBLASTP
23121422312387246XRE family transcriptional regulatorQuickGO ontologyBLASTP
23123932312767375hypothetical proteinBLASTP
23127552312922168hypothetical protein
23129922313180189hypothetical protein
23132052313384180carbon storage regulatorQuickGO ontologyBLASTP
23134492314384936hypothetical proteinBLASTP
231446323154671005hypothetical proteinBLASTP
23155952315996402hypothetical proteinBLASTP
23161512317119969hypothetical proteinBLASTP
23172192317491273hypothetical protein
231808223191101029hypothetical proteinBLASTP
23199222320629708hypothetical proteinBLASTP
232063223226171986hypothetical proteinBLASTP
23226142322973360DNA sulfur modification protein DndEQuickGO ontologyBLASTP
232606123274581398phage integraseQuickGO ontologyBLASTP
232773023295861857ATPGTP-binding proteinQuickGO ontologyBLASTP
23296142329994381MazG nucleotide pyrophosphohydrolase domain-containing proteinQuickGO ontologyBLASTP
23303872330608222hypothetical proteinBLASTP
233077323321191347hypothetical proteinBLASTP
233211623384126297hypothetical proteinBLASTP