Pre_GI: BLASTP Hits

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Query: NC_018080:2288700:2320632 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 2320632, End: 2322617, Length: 1986

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:857428:8679388679388699201983Pseudomonas fluorescens PfO-1, complete genomehypothetical protein0922
NC_003155:3652587:3672836367283636748632028Streptomyces avermitilis MA-4680, complete genomehypothetical protein7e-57222
NC_011768:5900500:5918612591861259205911980Desulfatibacillum alkenivorans AK-01, complete genomeDNA sulfur modification protein DndD2e-56221
NC_016629:2784000:2808959280895928109291971Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA sulfur modification protein DndD3e-55216
NC_019940:2997439:3001463300146330034782016Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA sulfur modification protein DndD7e-51202
NC_010397:1099312:1108474110847411104501977Mycobacterium abscessus chromosome Chromosome, complete sequenceConserved hypothetical protein (ATPase?)6e-47189
NC_018681:867230:8790928790928808281737Nocardia brasiliensis ATCC 700358 chromosome, complete genomeDNA sulfur modification protein DndD2e-43177
NC_013510:170199:1867811867811887751995Thermomonospora curvata DSM 43183, complete genomeDNA sulfur modification protein DndD6e-34145
NC_018643:1080514:1104032110403211059991968Alpha proteobacterium HIMB5 chromosome, complete genomeDNA sulfur modification protein DndD4e-31137
NC_012483:3672768:3679926367992636818931968Acidobacterium capsulatum ATCC 51196, complete genomeDNA sulfur modification protein DndD1e-28128
NC_012691:1743038:1753349175334917553642016Tolumonas auensis DSM 9187, complete genomeDNA sulfur modification protein DndD1e-27125
NC_015968:511282:5222935222935242691977Enterobacter asburiae LF7a chromosome, complete genomeDNA sulfur modification protein DndD2e-27124
NC_009483:2854500:2859230285923028612061977Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein2e-27124
NC_007645:7136956:7164308716430871662991992Hahella chejuensis KCTC 2396, complete genomeATPase involved in DNA repair9e-27122
NC_011415:4767892:4780428478042847824732046Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-26122
NC_013282:551219:5693565693565713922037Cronobacter turicensis, complete genomehypothetical protein1e-26122
NC_020064:521500:5393485393485413482001Serratia marcescens FGI94, complete genomeDNA sulfur modification protein DndD2e-25117
NC_011832:1399446:1408047140804714100802034Candidatus Methanosphaerula palustris E1-9c, complete genomeDNA sulfur modification protein DndD2e-24115
NC_009436:522649:5357595357595377592001Enterobacter sp. 638, complete genomeSMC domain-containing protein2e-24114
NC_011748:4950723:4959215495921549612632049Escherichia coli 55989, complete genomeputative ATPase involved in DNA thiolation2e-24114
CU928145:4950723:4959215495921549612632049Escherichia coli 55989 chromosome, complete genomeputative ATPase involved in DNA thiolation2e-24114
NC_009901:2787978:2802433280243328044632031Shewanella pealeana ATCC 700345, complete genomeSMC domain protein4e-23110
NC_014012:2411096:2425201242520124272162016Shewanella violacea DSS12, complete genomehypothetical protein3e-23110
NC_009712:334143:3510463510463530672022Candidatus Methanoregula boonei 6A8, complete genomeSMC protein-like protein3e-23110
NC_013971:3296272:3311210331121033132102001Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA-binding protein6e-23109
NC_013961:441719:4580904580904600902001Erwinia amylovora, complete genomeStructural maintenance of chromosomes protein 36e-23109
NC_008209:761487:7771087771087790601953Roseobacter denitrificans OCh 114, complete genomehypothetical protein2e-20101
NC_020210:2133996:2169065216906521710802016Geobacillus sp. GHH01, complete genomeDNA sulfur modification protein3e-20100
NC_009792:3245368:3257136325713632591331998Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1997.8
NC_015690:7785875:7820164782016478221461983Paenibacillus mucilaginosus KNP414 chromosome, complete genomeDNA repair ATPase5e-1996.7
NC_012673:2535427:2555894255589425579062013Exiguobacterium sp. AT1b, complete genomeDNA sulfur modification protein DndD1e-1895.5
NC_020210:2133996:2165075216507521670962022Geobacillus sp. GHH01, complete genomeDNA sulfur modification protein1e-1895.1
NC_012673:2535427:2561237256123725632522016Exiguobacterium sp. AT1b, complete genomeDNA sulfur modification protein DndD3e-1894
NC_020304:752012:7618227618227638402019Desulfocapsa sulfexigens DSM 10523, complete genomeDNA sulfur modification protein DndD4e-1480.5
NC_008782:3110744:3120378312037831224292052Acidovorax sp. JS42, complete genomehypothetical protein2e-1378.2
NC_011832:1399446:1417205141720514191961992Candidatus Methanosphaerula palustris E1-9c, complete genomehypothetical protein1e-0965.9
NC_015510:4982255:4994147499414749962522106Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSMC domain-containing protein8e-0962.8
NC_003155:3652587:3664680366468036667342055Streptomyces avermitilis MA-4680, complete genomehypothetical protein9e-0962.8
NC_013062:1298500:1314231131423113163302100Flavobacteriaceae bacterium 3519-10, complete genomeATPase involved in DNA repair2e-0861.6
NC_012673:2535427:2542852254285225448702019Exiguobacterium sp. AT1b, complete genomeSMC domain protein3e-0861.2
NC_009901:2787978:2808131280813128091951065Shewanella pealeana ATCC 700345, complete genomehypothetical protein5e-0757
NC_008212:1295061:1304491130449113065542064Haloquadratum walsbyi DSM 16790, complete genomechromosome segregation protein7e-0756.2
NC_019940:2997439:3005190300519030072862097Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein8e-0756.2
NC_008209:761487:7881357881357901862052Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-0654.3
NC_009718:518873:5392905392905412181929Fervidobacterium nodosum Rt17-B1, complete genomeSMC domain-containing protein3e-0654.3