Pre_GI Gene

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Host: NC_018000 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018000:3371829 Sinorhizobium fredii USDA 257 chromosome, complete genome

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
337182933731601332hypothetical proteinBLASTP
33732013373881681two-component system response regulatorQuickGO ontologyBLASTP
337384233756021761sensor kinase proteinQuickGO ontologyBLASTP
33760113376925915methionyl-tRNA formyltransferase FmtQuickGO ontologyBLASTP
33770523377204153hypothetical protein
337750833793431836MPA1 family proteinQuickGO ontologyBLASTP
337943433806391206lipopolysaccharide core biosynthesis mannosyltransferase LpcCQuickGO ontologyBLASTP
338096133820821122hypothetical proteinBLASTP
33824973383423927sulfotransferase domain-containing proteinQuickGO ontologyBLASTP
338345333849341482hypothetical proteinBLASTP
33851223386015894ATPGTP-binding proteinQuickGO ontologyBLASTP
33861533386989837heparan sulfate glucosamine 3-O-sulfotransferase 3B1QuickGO ontologyBLASTP
338702933883661338inner membrane protein YghQQuickGO ontologyBLASTP
338865933899121254exopolysaccharide production protein ExoFQuickGO ontologyBLASTP
33899673390656690sugar transferase EpsLQuickGO ontologyBLASTP
33907303391416687hypothetical proteinBLASTP
339151233927291218spore coat polysaccharide biosynthesis protein SpsCQuickGO ontologyBLASTP
339272633938921167hypothetical protein