Pre_GI Gene

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Host: NC_017986 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017986:4790482 Pseudomonas putida ND6 chromosome, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
479048247914831002hypothetical proteinBLASTP
47914804791815336hypothetical proteinBLASTP
47918124792108297hypothetical proteinBLASTP
47921084792467360sulfur relay protein TusCQuickGO ontologyBLASTP
47924694792924456sulfur transfer complex subunit TusDQuickGO ontologyBLASTP
479295747943361380uracil-xanthine permeaseQuickGO ontologyBLASTP
47943274794503177hypothetical protein
47946514795322672hypothetical proteinBLASTP
47957374795865129hypothetical protein
47965034797270768short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
47973064798136831LysR family transcriptional regulatorQuickGO ontologyBLASTP
47982454798364120hypothetical protein
479836347996401278RuBisCO-like proteinQuickGO ontologyBLASTP
479964448010351392type III effector Hrp-dependent outerQuickGO ontologyBLASTP
480109648024391344major facilitator transporterQuickGO ontologyBLASTP
480250748040151509pyruvate kinaseQuickGO ontologyBLASTP
48041774804350174hypothetical protein
480434348056111269phosphopyruvate hydrataseQuickGO ontologyBLASTP
48057204807249153023-bisphosphoglycerate-independent phosphoglycerate mutaseQuickGO ontologyBLASTP
480731848077614444-oxalocrotonate tautomeraseQuickGO ontologyBLASTP
48078094808195387PaaI proteinQuickGO ontologyBLASTP
48081924808530339MarR family transcriptional regulatorQuickGO ontologyBLASTP
48085644808668105hypothetical protein
48088324809734903LysR family transcriptional regulatorQuickGO ontologyBLASTP
48098654810611747short chain dehydrogenaseQuickGO ontologyBLASTP
48107154811398684glutathione S-transferase domain-containing proteinQuickGO ontologyBLASTP
48114094811528120hypothetical protein
48116714812225555hypothetical proteinBLASTP
481253848148082271copper amine oxidaseQuickGO ontologyBLASTP
481501548161091095cobalamin synthesis proteinQuickGO ontologyBLASTP
481610648177731668amidohydrolase 3QuickGO ontologyBLASTP
48178964818792897hypothetical proteinBLASTP
48189114819822912putative AraC family transcriptional regulatorQuickGO ontologyBLASTP
48201734820292120hypothetical protein
48203334820455123hypothetical protein
48206094821142534thioesterase superfamily proteinQuickGO ontologyBLASTP
48211914822177987aldoketo reductase family oxidoreductaseQuickGO ontologyBLASTP
48222874822736450MarR family transcriptional regulatorQuickGO ontologyBLASTP
48229304823049120hypothetical protein
48230664823281216lipoproteinQuickGO ontologyBLASTP
48233514823473123lipoproteinQuickGO ontologyBLASTP
48237564823959204hypothetical protein
48240854824420336helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
48246134824858246hypothetical protein
48249664825310345DNA-directed DNA polymeraseQuickGO ontologyBLASTP
48253424825482141hypothetical protein
48254864826160675hypothetical protein
48264834826659177hypothetical protein
482671748282131497hypothetical proteinBLASTP
48283294828694366putative transcriptional regulator MvaT P16 subunitQuickGO ontologyBLASTP
48289504829240291hypothetical proteinBLASTP
48294664829573108hypothetical protein
48296994830202504hypothetical proteinBLASTP
48309374831245309putative transposaseQuickGO ontologyBLASTP
48312904832099810putative integraseQuickGO ontologyBLASTP
48323284832654327hypothetical proteinBLASTP
48328364832967132hypothetical protein
48330994833221123hypothetical protein
48333854834056672hypothetical proteinBLASTP
483499248362001209major facilitator transporterQuickGO ontologyBLASTP
48363574836962606TetR family transcriptional regulatorQuickGO ontologyBLASTP
483706448383291266chloride channel core proteinQuickGO ontologyBLASTP
483856348399241362NaH antiporter NhaAQuickGO ontologyBLASTP
48400344840183150hypothetical protein
484046748419211455cation transporterQuickGO ontologyBLASTP
48421324842296165hypothetical protein
484228948429306423-oxoadipate CoA-transferase subunit BQuickGO ontologyBLASTP