Pre_GI Gene

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Host: NC_017271 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:2906000 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29060262906781756exopolysaccharide xanthan biosynthesis glycosyltransferase GumMQuickGO ontologyBLASTP
29068252907619795GumL proteinQuickGO ontologyBLASTP
290766129086771017exopolysaccharide xanthan biosynthesis glucuronosyltransferase GumKQuickGO ontologyBLASTP
290892829104271500GumJ proteinQuickGO ontologyBLASTP
291042429114731050exopolysaccharide xanthan biosynthesis glycosyltransferase GumIQuickGO ontologyBLASTP
291147029126121143exopolysaccharide xanthan biosynthesis glycosyltransferase GumHQuickGO ontologyBLASTP
291268029137501071exopolysaccharide xanthan biosynthesis acetyltransferase GumGQuickGO ontologyBLASTP
291374729148021056exopolysaccharide xanthan biosynthesis acetyltransferase GumFQuickGO ontologyBLASTP
291483829161241287exopolysaccharide xanthan biosynthesis polymerase GumEQuickGO ontologyBLASTP
291621929176731455exopolysaccharide xanthan biosynthesis glycosyltransferase GumDQuickGO ontologyBLASTP
29178002917958159hypothetical protein
291791629193341419exopolysaccharide xanthan biosynthesis chain length determinant protein GumCQuickGO ontologyBLASTP
29193372919978642exopolysaccharide xanthan biosynthesis export protein GumBQuickGO ontologyBLASTP
2920505292058177tRNA-ProQuickGO ontologyBLASTP
29206422920998357transcription regulator proteinQuickGO ontologyBLASTP
29209792921278300integration host factor subunit alphaQuickGO ontologyBLASTP
292129929236742376phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
292379729248071011phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
2925106292546536050S ribosomal protein L20QuickGO ontologyBLASTP
2925476292567319850S ribosomal protein L35QuickGO ontologyBLASTP
29259142926357444translation initiation factor IF-3QuickGO ontologyBLASTP
292650529284091905threonyl-tRNA synthetaseQuickGO ontologyBLASTP