Pre_GI Gene

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Host: NC_017271 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:2278500 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
227909922825963498O-antigen biosynthesis proteinQuickGO ontologyBLASTP
22840262284289264O-antigen biosynthesis proteinQuickGO ontologyBLASTP
22845042285256753methyltransferase FkbM family proteinQuickGO ontologyBLASTP
228526822860177503-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
228606122873351275hypothetical proteinBLASTP
22873712287487117hypothetical protein
228762122889911371methyltransferase FkbM family proteinQuickGO ontologyBLASTP
22891412289764624hypothetical proteinBLASTP
228975422908871134ring hydroxylating dioxygenase subunit alphaQuickGO ontologyBLASTP
22909032291553651acetyltransferaseQuickGO ontologyBLASTP
22915532292305753dehydrogenases with different specificitiesQuickGO ontologyBLASTP
229230222930757743-oxoacyl-ACP reductaseQuickGO ontologyBLASTP
2293072229411210413-oxoacyl-ACP synthaseQuickGO ontologyBLASTP
22941182294342225hypothetical proteinBLASTP
229440722955971191nucleotide sugar transaminaseQuickGO ontologyBLASTP
229563222971221491transcriptional regulatorQuickGO ontologyBLASTP
22971152297498384two-component system response regulator proteinQuickGO ontologyBLASTP
229750722989581452RNA polymerase sigma-54 factorQuickGO ontologyBLASTP
22991362299768633two-component system response regulator proteinQuickGO ontologyBLASTP
22998382300404567hypothetical proteinBLASTP
23004042300688285hypothetical proteinBLASTP