Pre_GI Gene

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Host: NC_017217 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017217:1607679 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16076791608605927alpha beta hydrolaseQuickGO ontologyBLASTP
16086851609299615hypothetical proteinBLASTP
16094851609880396thioredoxinQuickGO ontologyBLASTP
161018116112391059hypothetical proteinBLASTP
161151616131261611undecaprenyl-phosphate sugar phosphotransferaseQuickGO ontologyBLASTP
16133891613838450hypothetical proteinBLASTP
161425016156891440hypothetical proteinBLASTP
16156731616614942glycosyltransferaseQuickGO ontologyBLASTP
161675816184251668hypothetical proteinBLASTP
16187911619681891dTDP-glucose pyrophosphorylaseQuickGO ontologyBLASTP
161969516211461452dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
162122116222401020dTDP-D-glucose 46-dehydrataseQuickGO ontologyBLASTP
16223961623361966glycosyltransferase-like proteinQuickGO ontologyBLASTP
162336316248141452flippase WzxQuickGO ontologyBLASTP
16248401625727888glycosyl transferase family proteinQuickGO ontologyBLASTP
162574616267591014glycosyltransferaseQuickGO ontologyBLASTP
162675216280981347hypothetical proteinBLASTP
16280951628988894glycosyltransferaseQuickGO ontologyBLASTP
16290011629765765hypothetical proteinBLASTP
16297701630657888glycosyl transferase family proteinQuickGO ontologyBLASTP
16308071631739933polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
163180416330511248uridine diphosphate glucose dehydrogenaseQuickGO ontologyBLASTP
163317216345061335flippase WzxQuickGO ontologyBLASTP
163465616356601005hypothetical proteinBLASTP
16357131636576864glycosyl transferase family proteinQuickGO ontologyBLASTP
163667016382051536galactosyl transferase CpsDQuickGO ontologyBLASTP
16384821638823342hypothetical proteinBLASTP
163889616406201725hypothetical proteinBLASTP
164075816420741317H-stimulated manganese uptake system proteinQuickGO ontologyBLASTP
16422201642948729hypothetical proteinBLASTP
16431071643982876pyridoxine biosynthesis proteinQuickGO ontologyBLASTP
16440091644659651glutamine amidotransferase subunit PdxTQuickGO ontologyBLASTP
164500216461381137nucleotide sugar epimeraseQuickGO ontologyBLASTP
16462431646707465polysaccharide biosynthesis protein CpsFQuickGO ontologyBLASTP
16467071647207501glycosyltransferase 28-like proteinQuickGO ontologyBLASTP
16472851648238954putative glycosyltransferaseQuickGO ontologyBLASTP
16482311649067837glycosyl transferase family proteinQuickGO ontologyBLASTP
164925316503861134hypothetical proteinBLASTP
165051116540923582ABC-type multidrug transport system ATPase and permease componentQuickGO ontologyBLASTP
165433416561541821long-chain-fatty acid CoA ligaseQuickGO ontologyBLASTP
165622916576171389hypothetical proteinBLASTP
16578051658371567hypothetical proteinBLASTP
165845616602251770hypothetical proteinBLASTP
166035116618231473Etk-like tyrosine kinaseQuickGO ontologyBLASTP