Pre_GI: BLASTN Hits

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Query: NC_017217:1607679 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Start: 1607679, End: 1662599, Length: 54921

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012814:15992411599241165827959039Bifidobacterium animalis subsp. lactis Bl-04, complete genome0108600BLASTN svgBLASTP svg
NC_012815:16039161603916165709953184Bifidobacterium animalis subsp. lactis DSM 10140, complete genome0105000BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-141511BLASTN svgBLASTP svg
NC_010816:18524061852406187962927224Bifidobacterium longum DJO10A, complete genome1e-136496BLASTN svgBLASTP svg
NC_015052:21815142181514221381832305Bifidobacterium longum subsp. infantis 157F, complete genome2e-117432BLASTN svgBLASTP svg
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome4e-72281BLASTN svgBLASTP svg
NC_013714:2086526*2086526215532168796Bifidobacterium dentium Bd1, complete genome1e-71280BLASTN svgBLASTP svg
NC_008618:17297391729739176070830970Bifidobacterium adolescentis ATCC 15703, complete genome3e-45192BLASTN svgBLASTP svg
NC_015389:1298689*1298689133142232734Coriobacterium glomerans PW2 chromosome, complete genome2e-30143BLASTN svgBLASTP svg
NC_009800:21560912156091218719031100Escherichia coli HS, complete genome3e-29139BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome3e-26129BLASTN svgBLASTP svg
NC_019673:32536503253650327924925600Saccharothrix espanaensis DSM 44229 complete genome2e-24123BLASTN svgBLASTP svg
NC_008618:17044621704462172309918638Bifidobacterium adolescentis ATCC 15703, complete genome5e-22115BLASTN svgBLASTP svg
NC_013850:16580101658010169680438795Klebsiella variicola At-22 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_009648:26997392699739273776838030Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-19107BLASTN svgBLASTP svg
NC_013446:3147202*3147202318258835387Comamonas testosteroni CNB-2, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008541:29895002989500300743117932Arthrobacter sp. FB24 chromosome 1, complete sequence3e-1799.6BLASTN svgBLASTP svg
NC_019940:92907192907195489925829Thioflavicoccus mobilis 8321 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_007952:14530001453000147986226863Burkholderia xenovorans LB400 chromosome 2, complete sequence2e-1593.7BLASTN svgBLASTP svg
NC_015067:45962645962649282633201Bifidobacterium longum subsp. longum JCM 1217, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_011886:26966712696671271597719307Arthrobacter chlorophenolicus A6, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_019962:175049717504971870599120103Natrinema pellirubrum DSM 15624, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_014924:32705473270547329089620350Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_008711:34543593454359349427739919Arthrobacter aurescens TC1, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_005773:11353741135374117481539442Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_013716:22551022255102228502629925Citrobacter rodentium ICC168, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_013959:2892660*2892660292827535616Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_007508:4283750*4283750431638632637Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_004369:37110937110940147530367Corynebacterium efficiens YS-314, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_013522:16833261683326171309929774Thermanaerovibrio acidaminovorans DSM 6589, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_013721:12045661204566122544920884Gardnerella vaginalis 409-05, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_021064:20852312085231211080625576Propionibacterium avidum 44067, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_003902:71447871447874861534138Xanthomonas campestris pv. campestris str. ATCC 33913, complete7e-0971.9BLASTN svgBLASTP svg
NC_007086:42934054293405431133917935Xanthomonas campestris pv. campestris str. 8004, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_015633:41358741358744184328257Vibrio anguillarum 775 chromosome chromosome I, complete sequence7e-0971.9BLASTN svgBLASTP svg
NC_020063:16597951659795169109931305Enterobacteriaceae bacterium strain FGI 57, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_002935:181902*18190220033418433Corynebacterium diphtheriae NCTC 13129, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_013715:1750403*1750403177144221040Rothia mucilaginosa DY-18, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_013744:30000030000034424844249Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, complete3e-0869.9BLASTN svgBLASTP svg
NC_014033:1808782*1808782184977940998Prevotella ruminicola 23 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015164:40238814023881404764723767Bacteroides salanitronis DSM 18170 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015947:56812456812459380225679Burkholderia sp. JV3 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_008942:87506087506090754032481Methanocorpusculum labreanum Z, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009720:39681013968101399101722917Xanthobacter autotrophicus Py2, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_012791:82137182137185170230332Variovorax paradoxus S110 chromosome 1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_013222:72138472138474880827425Robiginitalea biformata HTCC2501, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_014541:11659911165991120221836228Ferrimonas balearica DSM 9799 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_015954:66586966586969082824960Halophilic archaeon DL31 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_021184:29362442936244297222835985Desulfotomaculum gibsoniae DSM 7213, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009138:11389171138917117310234186Herminiimonas arsenicoxydans, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010508:93386293386296238928528Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014363:645397*64539768181236416Olsenella uli DSM 7084 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015424:16895001689500172544435945Aeromonas veronii B565 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015677:89667389667391821221540Ramlibacter tataouinensis TTB310 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015968:29753512975351299850323153Enterobacter asburiae LF7a chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_007973:29520042952004297379621793Ralstonia metallidurans CH34 chromosome 1, complete sequence6e-0661.9BLASTN svgBLASTP svg