Pre_GI Gene

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Host: NC_017215 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017215:1605917 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
160591716070261110NAD diphosphataseQuickGO ontologyBLASTP
160702616079679423-oxoadipate enol-lactonaseQuickGO ontologyBLASTP
16080741608829756hypothetical proteinBLASTP
16088321609227396Protein-disulfide reductaseQuickGO ontologyBLASTP
160949216105861095Membrane-bound transglycosylaseQuickGO ontologyBLASTP
161086316125391677hypothetical proteinBLASTP
16127361613191456hypothetical proteinBLASTP
161349816150361539hypothetical proteinBLASTP
161502016160271008dolichyl-phosphate beta-D-mannosyltransferaseQuickGO ontologyBLASTP
161610516180301926hypothetical proteinBLASTP
16181381619028891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
161904216204931452dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
162056816216111044dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
16217431622708966HexosyltransferaseQuickGO ontologyBLASTP
162271016241731464Oligosaccharide translocase flippaseQuickGO ontologyBLASTP
16241871625074888hypothetical proteinBLASTP
162509316261241032HexosyltransferaseQuickGO ontologyBLASTP
162609916274451347Oligosaccharide repeat unit polymeraseQuickGO ontologyBLASTP
16274421628335894HexosyltransferaseQuickGO ontologyBLASTP
16283481629193846HexosyltransferaseQuickGO ontologyBLASTP
16291171630019903HexosyltransferaseQuickGO ontologyBLASTP
163015416312691116capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
163115116323981248UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
163251916339551437Oligosaccharide translocase flippaseQuickGO ontologyBLASTP
163400316350251023hypothetical proteinBLASTP
16350601635923864hypothetical proteinBLASTP
163601716375521536hypothetical proteinBLASTP
16377621637872111hypothetical proteinBLASTP
16378291638170342hypothetical proteinBLASTP
163824316399671725Multidrug resistance protein BQuickGO ontologyBLASTP
164010516414631359protein MntHQuickGO ontologyBLASTP
16415671642328762hypothetical proteinBLASTP
16424541643329876LyaseQuickGO ontologyBLASTP
16433561644006651Transferase transferring nitrogenous groupsQuickGO ontologyBLASTP
164434916454851137Isomerase acting on carbohydrates and derivativesQuickGO ontologyBLASTP
16455901646054465Beta-14-glucuronosyltransferase accessory proteinQuickGO ontologyBLASTP
16460421646554513N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferaseQuickGO ontologyBLASTP
16466321647585954HexosyltransferaseQuickGO ontologyBLASTP
16475781648414837HexosyltransferaseQuickGO ontologyBLASTP
164860016497331134Polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
164985816537393882Multidrug resistance ABC transporter ATP-binding and permease proteinQuickGO ontologyBLASTP
165361216555011890long-chain-fatty-acid--CoA ligaseQuickGO ontologyBLASTP
165556316569751413Septum formation protein MafQuickGO ontologyBLASTP
16571391657705567protein-tyrosine-phosphataseQuickGO ontologyBLASTP
165779016596611872hypothetical proteinBLASTP
165968516612321548Non-specific protein-tyrosine kinaseQuickGO ontologyBLASTP
16620461662900855TolA-like proteinQuickGO ontologyBLASTP