Pre_GI Gene

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Host: NC_016848 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016848:775822 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
775822776799978M23B subfamily peptidaseQuickGO ontologyBLASTP
776810777289480hypothetical proteinBLASTP
777355777870516hypothetical proteinBLASTP
777926778714789DNA-directed RNA polymerase sigma subunit WhiGQuickGO ontologyBLASTP
7787237806931971hypothetical proteinBLASTP
780730781302573hypothetical proteinBLASTP
781317782231915putative flagellar synthesis regulator FleNQuickGO ontologyBLASTP
7822037835161314flagellar-associated GTP-binding protein FlhFQuickGO ontologyBLASTP
7835517856742124IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
7856837868131131IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
786810787607798IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
787620787901282IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
787923788738816IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
788735789523789putative flagellar biogenesis protein FliOQuickGO ontologyBLASTP
7894597905051047bifunctional chemotaxis protein CheCflagellar motor switch protein FliYQuickGO ontologyBLASTP
7904987915321035flagellar motor switch protein FliMQuickGO ontologyBLASTP
791554792102549flagellar basal body-associated protein FliLQuickGO ontologyBLASTP
792212792934723Mot family proton H or sodium Na transporter MotBQuickGO ontologyBLASTP
792934793713780Mot family proton H or sodium Na transporter MotAQuickGO ontologyBLASTP
793729793926198flagellar protein FlbDQuickGO ontologyBLASTP
7939847953751392flagellar hook protein FlgEQuickGO ontologyBLASTP
795446795907462flagellar basal body rod modification protein FlgDQuickGO ontologyBLASTP