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Query: NC_016848:775822 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Start: 775822, End: 795907, Length: 20086

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010741:775000*77500079478519786Treponema pallidum subsp. pallidum SS14, complete genome022120BLASTN svgBLASTP svg
NC_000919:77378477378479386920086Treponema pallidum subsp. pallidum str. Nichols, complete genome022120BLASTN svgBLASTP svg
NC_015714:768500*76850079153823039Treponema paraluiscuniculi Cuniculi A chromosome, complete genome021590BLASTN svgBLASTP svg
NC_021184:2238500*2238500226036721868Desulfotomaculum gibsoniae DSM 7213, complete genome2e-1075.8BLASTN svgBLASTP svg