Pre_GI Gene

Some Help

Host: NC_016842 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016842:775368 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
775368776345978M23B subfamily peptidaseQuickGO ontologyBLASTP
776356776835480hypothetical proteinBLASTP
776901777416516hypothetical proteinBLASTP
777472778260789DNA-directed RNA polymerase sigma subunit WhiGQuickGO ontologyBLASTP
7782697802391971hypothetical proteinBLASTP
780276780848573hypothetical proteinBLASTP
780863781777915putative flagellar synthesis regulator FleNQuickGO ontologyBLASTP
7817497830621314flagellar-associated GTP-binding protein FlhFQuickGO ontologyBLASTP
7830977852202124IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
7852297863591131IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
786356787153798IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
787166787447282IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
787469788284816IIISP family Type III virulence-related secretory pathway proteinQuickGO ontologyBLASTP
788281789069789putative flagellar biogenesis protein FliOQuickGO ontologyBLASTP
7890057900511047bifunctional chemotaxis protein CheCflagellar motor switch protein FliYQuickGO ontologyBLASTP
7900447910781035flagellar motor switch protein FliMQuickGO ontologyBLASTP
791100791648549flagellar basal body-associated protein FliLQuickGO ontologyBLASTP
791758792480723Mot family proton H or sodium Na transporter MotBQuickGO ontologyBLASTP
792480793259780Mot family proton H or sodium Na transporter MotAQuickGO ontologyBLASTP
793275793472198flagellar protein FlbDQuickGO ontologyBLASTP
7935307949211392flagellar hook protein FlgEQuickGO ontologyBLASTP