Pre_GI Gene

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Host: NC_016445 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:2663837 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26638372664619783mannosyltransferase OCH1-like enzymeQuickGO ontologyBLASTP
266462226656711050hypothetical proteinBLASTP
266566826667051038ADP-heptose--LPS heptosyltransferase IIQuickGO ontologyBLASTP
266670526679041200O-antigen ligaseQuickGO ontologyBLASTP
26679062668466561hexapeptide repeat-containing transferaseQuickGO ontologyBLASTP
266848026702521773hypothetical proteinBLASTP
26704112671355945ADP-L-glycero-D-mannoheptose-6-epimeraseQuickGO ontologyBLASTP
267179726731941398mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
267319726745881392phosphomannomutaseQuickGO ontologyBLASTP
267459126757121122GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
267572326768261104perosamine synthaseQuickGO ontologyBLASTP
267683226782141383RfbG proteinQuickGO ontologyBLASTP
26781862678980795lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
26789822679734753lipopolysaccharideO-antigen transport proteinQuickGO ontologyBLASTP
26797732680015243acyl carrier proteinQuickGO ontologyBLASTP
268041726814361020RfbL proteinQuickGO ontologyBLASTP
268144526825691125acetaldehyde dehydrogenaseQuickGO ontologyBLASTP
268256026850372478acyl protein synthaseacyl-CoA reductase RfbNQuickGO ontologyBLASTP
26851072685673567galactoside O-acetyltransferaseQuickGO ontologyBLASTP
2685823268590381hypothetical proteinBLASTP
26860612686258198hypothetical proteinBLASTP
26862652686969705hypothetical proteinBLASTP
26873242688226903RfbT-related proteinQuickGO ontologyBLASTP
268826126894931233lipopolysaccharide biosynthesis protein RfbVQuickGO ontologyBLASTP
268938126912461866mannosyl-transferaseQuickGO ontologyBLASTP
26913072691423117hypothetical proteinBLASTP
26913992692370972UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
26923782692932555lipid carrier UDP-N-acetylgalactosaminyltransferaseQuickGO ontologyBLASTP
26929132693035123hypothetical proteinBLASTP
269312626944421317metallo-beta-lactamase family proteinQuickGO ontologyBLASTP
269470426959421239hypothetical proteinBLASTP
26959972696569573uracil-DNA glycosylaseQuickGO ontologyBLASTP
26965692697492924D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
26974852698153669hypothetical proteinBLASTP
269851626997151200mannose-6-phosphate isomeraseQuickGO ontologyBLASTP
26996932700661969fructokinaseQuickGO ontologyBLASTP
270100927020671059hypothetical proteinBLASTP
27020762702240165hypothetical protein
27024392702711273DNA-binding protein HUQuickGO ontologyBLASTP