Pre_GI Gene

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Host: NC_015976 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015976:2150676 Sphingobium sp. SYK-6, complete genome

Host Lineage: Sphingobium; Sphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Lignin degrading bacterium isolated from the waste liquor of a kraft pulp mill.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21506762151605930virulence-associated protein EQuickGO ontologyBLASTP
21522482153003756LuxR family transcriptional regulatorQuickGO ontologyBLASTP
21530822153708627putative autoinducer synthesis proteinQuickGO ontologyBLASTP
21537212154635915phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
21546422154983342hypothetical proteinBLASTP
21551602155393234hypothetical proteinBLASTP
21556102156518909hypothetical proteinBLASTP
215651821576031086hypothetical proteinBLASTP
21581642158709546RNA polymerase ECF-type sigma factorQuickGO ontologyBLASTP
215870621597341029putative anti-sigma factorQuickGO ontologyBLASTP
215982321623842562TonB-dependent receptor-like proteinQuickGO ontologyBLASTP
216243221644622031hypothetical proteinBLASTP
216445021661891740hypothetical proteinBLASTP
21671752167789615putative GntR family transcriptional regulatorQuickGO ontologyBLASTP
21677962168218423hypothetical protein
21683762168783408hypothetical protein
21692162170007792putative protein-disulfide isomeraseQuickGO ontologyBLASTP
21701572170516360hypothetical protein
21706462170912267hypothetical proteinBLASTP
21709182171553636putative sex pilus assembly and synthesis proteinQuickGO ontologyBLASTP
21716272172373747hypothetical proteinBLASTP
217237021737011332conjugal transfer protein TraBQuickGO ontologyBLASTP
21737282174348621hypothetical proteinBLASTP
217434521768672523type IV secretory pathway VirB4 componentQuickGO ontologyBLASTP
21768642177193330hypothetical protein
21771902177597408hypothetical protein
21776482177908261hypothetical protein
21779052178141237hypothetical protein
21781312178790660plasmid transfer protein TraWQuickGO ontologyBLASTP
217878721798001014conjugal transfer protein TraUQuickGO ontologyBLASTP