Pre_GI Gene

Some Help

Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:5225903 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52259035226055153hypothetical protein
52260525226720669DSBA oxidoreductaseQuickGO ontologyBLASTP
52269845227625642FMN-dependent NADH-azoreductaseQuickGO ontologyBLASTP
522806852291951128transposase mutator typeQuickGO ontologyBLASTP
52292115229339129hypothetical proteinBLASTP
522940452305941191secreted proteinQuickGO ontologyBLASTP
52314585231823366hypothetical proteinBLASTP
52318205232287468BLASTP
52335765234457882short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
52346795235545867helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
52357915236495705transposase IS4 family proteinQuickGO ontologyBLASTP
52367625237721960hypothetical proteinBLASTP
52379005238592693hypothetical proteinBLASTP
52388395239042204BLASTP
52391755240089915alcohol dehydrogenase GroES domain-containing proteinQuickGO ontology
52416075241849243BLASTP
52418295242575747ThioesteraseQuickGO ontologyBLASTP
52435935244090498phosphopantetheine-binding proteinQuickGO ontologyBLASTP
524404852463842337amino acid adenylation domain-containing proteinQuickGO ontologyBLASTP
524635952477081350transposase IS605 OrfB familyQuickGO ontologyBLASTP
52477375248153417transposase IS200-family proteinQuickGO ontologyBLASTP