Pre_GI: BLASTN Hits

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Query: NC_015957:5225903 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5225903, End: 5248153, Length: 22251

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015957:527777*52777754559917823Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome02732BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome02730BLASTN svgBLASTP svg
NC_015951:10736010736012542918070Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete02571BLASTN svgBLASTP svg
NC_010572:113201832018Streptomyces griseus subsp. griseus NBRC 13350, complete genome01467BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome01467BLASTN svgBLASTP svg
NC_018750:60702606070260610109930840Streptomyces venezuelae ATCC 10712, complete genome4e-147529BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome9e-142511BLASTN svgBLASTP svg
NC_015957:51365005136500515422817729Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-80307BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome5e-51210BLASTN svgBLASTP svg
NC_003888:7028165*7028165706572937565Streptomyces coelicolor A3(2), complete genome7e-44186BLASTN svgBLASTP svg
NC_013757:3651646*3651646369128339638Geodermatophilus obscurus DSM 43160, complete genome6e-35157BLASTN svgBLASTP svg
NC_003888:56225562259004333819Streptomyces coelicolor A3(2), complete genome8e-25123BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome1e-23119BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome1e-23119BLASTN svgBLASTP svg
NC_009142:54598195459819548206622248Saccharopolyspora erythraea NRRL 2338, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015951:46000460007890132902Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete2e-1695.6BLASTN svgBLASTP svg
NC_015951:71697716979528623590Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete2e-1695.6BLASTN svgBLASTP svg
NC_021177:23096152309615233757227958Streptomyces fulvissimus DSM 40593, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015953:19838211983821200380019980Streptomyces sp. SirexAA-E chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020126:3383902*3383902342138737486Myxococcus stipitatus DSM 14675, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007333:14570001457000147599919000Thermobifida fusca YX, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020126:4517133*4517133455758540453Myxococcus stipitatus DSM 14675, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018681:441014*44101447306232049Nocardia brasiliensis ATCC 700358 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013131:33033373303337332128317947Catenulispora acidiphila DSM 44928, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete4e-1177.8BLASTN svgBLASTP svg
NC_004547:1683593*1683593172730343711Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014391:45705674570567459134920783Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013722:850307*85030787951329207Xanthomonas albilineans, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014210:25970002597000263744640447Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_014391:2875553*2875553290609930547Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018750:82105008210500823849928000Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015711:6522808*6522808656473541928Myxococcus fulvus HW-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014391:19102731910273196409853826Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013961:2579000*2579000261224833249Erwinia amylovora, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009142:54848835484883550966924787Saccharopolyspora erythraea NRRL 2338, complete genome3e-0661.9BLASTN svgBLASTP svg