Pre_GI Gene

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Host: NC_015703 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015703:6295500 Runella slithyformis DSM 19594 chromosome, complete genome

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6295642629598634550S ribosomal protein L20QuickGO ontologyBLASTP
62961076296550444hypothetical protein
62966346297200567AraC family transcriptional regulatorQuickGO ontologyBLASTP
629719762995422346TonB-dependent receptorQuickGO ontologyBLASTP
62996916300044354Heavy metal transportdetoxification proteinQuickGO ontologyBLASTP
630011463025732460hypothetical proteinBLASTP
63027406302931192cold-shock DNA-binding domain-containing proteinQuickGO ontologyBLASTP
63035426303802261hypothetical protein
630441463055201107response regulator receiver sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
63060606306803744two component AraC family transcriptional regulatorQuickGO ontologyBLASTP
63068726307534663YhhN family proteinQuickGO ontologyBLASTP
63076246308028405methylmalonyl-CoA epimeraseQuickGO ontologyBLASTP
63083246309250927Inositol oxygenaseQuickGO ontologyBLASTP
630937663104041029LacI family transcriptional regulatorQuickGO ontologyBLASTP
63103766311284909fatty acid hydroxylaseQuickGO ontologyBLASTP
63114016311895495phosphoribosylaminoimidazole carboxylase catalytic subunitQuickGO ontologyBLASTP
63120256312753729peptidoglycan-binding lysin domain-containing proteinQuickGO ontologyBLASTP
63127576313575819metallophosphoesteraseQuickGO ontologyBLASTP
63137506314382633sugar O-acyltransferase sialic acid O-acetyltransferase NeuD familyQuickGO ontologyBLASTP
631443063155301101DNA replication and repair protein recFQuickGO ontologyBLASTP
631566463166831020pyruvate dehydrogenase acetyl-transferring E1 component subunit alphaQuickGO ontologyBLASTP
63167726317506735hypothetical proteinBLASTP
631750363187291227glucokinaseQuickGO ontologyBLASTP
631919663225133318TonB-dependent receptor plugQuickGO ontologyBLASTP