Pre_GI Gene

Some Help

Host: NC_015703 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015703:5391478 Runella slithyformis DSM 19594 chromosome, complete genome

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
539147853928991422exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferaseQuickGO ontologyBLASTP
539343353961952763hypothetical proteinBLASTP
53961925396956765hypothetical proteinBLASTP
53971595398112954UDP-glucuronate 4-epimeraseQuickGO ontologyBLASTP
53983075399281975family 2 glycosyl transferaseQuickGO ontologyBLASTP
539945954010571599glycosyl transferase family proteinQuickGO ontologyBLASTP
540129154029431653hypothetical proteinBLASTP
54030415403763723hypothetical proteinBLASTP
540393254050651134Lipid A 3-O-deacylase-like proteinQuickGO ontologyBLASTP
540534254068261485hypothetical proteinBLASTP
54068235407686864dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
54079355408795861glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
540889454099521059dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
54099915410542552dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
54105835411440858hypothetical proteinBLASTP
541145254124681017oxidoreductase domain-containing proteinQuickGO ontologyBLASTP
541247654135521077hypothetical proteinBLASTP
541356954149601392group 1 glycosyl transferaseQuickGO ontologyBLASTP
54149355415870936family 2 glycosyl transferaseQuickGO ontologyBLASTP
541588654171361251group 1 glycosyl transferaseQuickGO ontologyBLASTP
54174575418416960family 2 glycosyl transferaseQuickGO ontologyBLASTP
541848454198271344hypothetical protein
542068154221891509polysaccharide biosynthesis proteinQuickGO ontology