Pre_GI Gene

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Host: NC_015703 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015703:3880903 Runella slithyformis DSM 19594 chromosome, complete genome

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
388090338821921290hypothetical proteinBLASTP
388238238838091428hypothetical protein
388394538851861242major facilitator superfamily proteinQuickGO ontologyBLASTP
38852483886114867AraC family transcriptional regulatorQuickGO ontologyBLASTP
38862613886455195
38865813886881301
38871903888149960transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
38882233888495273BLASTP
38886143888835222transcriptional regulatorQuickGO ontologyBLASTP
38888223889154333HipA N-terminal domain-containing proteinQuickGO ontologyBLASTP
38891513890095945HipA domain-containing proteinQuickGO ontologyBLASTP
38900963890551456BLASTP
389064338923671725hypothetical protein
38923643893086723hypothetical protein
38930943893348255hypothetical protein
38934503893758309type I restriction-modification system S subunitQuickGO ontologyBLASTP
389380539000416237transcription elongation factor GreAGreB domain-containing proteinQuickGO ontologyBLASTP
39003623901222861phospholipase DtransphosphatidylaseQuickGO ontologyBLASTP
390128939026681380restriction modification system DNA specificity domain-containing proteinQuickGO ontologyBLASTP
390266839041281461N-6 DNA methylaseQuickGO ontologyBLASTP
390413339073723240type I site-specific deoxyribonucleaseQuickGO ontologyBLASTP
390806239094291368integrase family proteinQuickGO ontologyBLASTP
39095283910418891hypothetical protein
39105683910846279hypothetical protein
39108333911258426VRR-NUC domain-containing proteinQuickGO ontologyBLASTP
39113313911579249hypothetical protein
39115823912277696hypothetical protein
39124713912758288hypothetical proteinBLASTP
39127553913000246hypothetical protein
39129933913190198hypothetical protein
39131743913428255hypothetical protein
39135353913996462phage terminase small subunit P27 familyQuickGO ontologyBLASTP
3914158391423174tRNA-ProQuickGO ontology
39142833914663381putative ModE family transcriptional regulatorQuickGO ontologyBLASTP
3914827391489872tRNA-GluQuickGO ontology
39151283915490363hypothetical proteinBLASTP
39154713916453983BLASTP
39166603916884225hypothetical protein
39168813917075195hypothetical protein
391725139188161566hypothetical proteinBLASTP
391882039200281209hypothetical proteinBLASTP
39200293920940912coenzyme PQQ synthesis protein BQuickGO ontologyBLASTP
39211773921512336BLASTP
392180139239092109DNA ligaseQuickGO ontologyBLASTP
39239753924190216hypothetical protein
39241833924596414Nucleotide-binding protein PIN domain-containing proteinQuickGO ontology