Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:6023926 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
602392660252961371putative transport-related membrane proteinQuickGO ontologyBLASTP
602562660270201395ethanolamine ammonia-lyase heavy chainQuickGO ontologyBLASTP
60270486027872825ethanolamine ammonia-lyase light chainQuickGO ontologyBLASTP
60279806028441462putative acetyltransferaseQuickGO ontologyBLASTP
60286776028919243Hypothetical proteinQuickGO ontology
60288536029215363Hypothetical proteinQuickGO ontology
60292276029883657membrane-related protein DedAQuickGO ontologyBLASTP
60298896030701813hypothetical proteinBLASTP
60308136031340528inorganic pyrophosphataseQuickGO ontologyBLASTP
60316386032267630putative regulatory proteinQuickGO ontologyBLASTP
60326536033618966hypothetical proteinBLASTP
60337476034130384hypothetical proteinBLASTP
603415560360411887hypothetical proteinBLASTP
60361596036476318hypothetical proteinBLASTP
603724060385141275levansucraseQuickGO ontologyBLASTP
603909660401001005Hypothetical proteinQuickGO ontology
604032860417401413putative aldehyde dehydrogenaseQuickGO ontologyBLASTP
604173760427951059putative homoserine dehydrogenaseQuickGO ontologyBLASTP
60430616043498438putative transcriptional regulator AsnC familyQuickGO ontologyBLASTP
604351060448741365threonine synthaseQuickGO ontologyBLASTP
60449066045790885putative transcription factor LysR familyQuickGO ontologyBLASTP
604585060472801431putative amino acid transport membrane proteinQuickGO ontologyBLASTP