Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:5002595 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
500259550038751281Hypothetical protein putative exported proteinQuickGO ontologyBLASTP
50039825004797816Hypothetical protein putative exported proteinQuickGO ontologyBLASTP
500481350061411329Hypothetical proteinQuickGO ontologyBLASTP
50061445006674531Hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
50067015006892192Hypothetical proteinQuickGO ontologyBLASTP
50070385007259222Hypothetical proteinQuickGO ontologyBLASTP
50075425008411870Putative response regulator YesN familyQuickGO ontologyBLASTP
50084595008890432Putative transcription factor MarR familyQuickGO ontologyBLASTP
50090795009792714hypothetical proteinBLASTP
500989550113791485hypothetical proteinBLASTP
501137650125211146Putative cystathionine gamma-synthaseQuickGO ontologyBLASTP
501258350138391257Putative aminotransferaseQuickGO ontologyBLASTP
50139075014539633hypothetical proteinBLASTP
5014811501488676tRNA-GlyQuickGO ontology
5015070501514576tRNA-GlyQuickGO ontology
50155955016353759hypothetical proteinBLASTP
501642950183961968Putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
501850750198951389Putative transcription factor GntR familyQuickGO ontologyBLASTP
50201005020861762Putative short chain dehydrogenaseQuickGO ontologyBLASTP
502108850220921005Putative oxidoreductaseQuickGO ontologyBLASTP