Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:4691868 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46918684692080213Putative phage regulatory proteinQuickGO ontology
46921334692831699Putative phage regulatory proteinQuickGO ontologyBLASTP
46930284693609582Putative phage immunity protein putative membrane proteinQuickGO ontologyBLASTP
46937484693999252hypothetical proteinBLASTP
46944054694614210Hypothetical proteinQuickGO ontology
46946274694941315Hypothetical proteinQuickGO ontology
46952004695457258Hypothetical proteinQuickGO ontology
46954544695768315hypothetical protein
46958024696047246Hypothetical proteinQuickGO ontology
46960444696265222Hypothetical proteinQuickGO ontology
46962624696453192hypothetical proteinBLASTP
46964504696659210hypothetical protein
469698046980651086Hypothetical proteinQuickGO ontology
46981204699088969Putative gifsy-1 prophage proteinQuickGO ontologyBLASTP
46990854699753669Putative phage exonucleaseQuickGO ontologyBLASTP
46999074700347441Hypothetical proteinQuickGO ontologyBLASTP
47004174700728312hypothetical proteinBLASTP
47007164701426711Hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
47015334701694162Hypothetical proteinQuickGO ontology
47017704702480711Hypothetical proteinQuickGO ontology
47025764702791216Hypothetical proteinQuickGO ontology
47030344703222189Hypothetical proteinQuickGO ontologyBLASTP
470352247049881467hypothetical proteinBLASTP
47050674705489423Hypothetical proteinQuickGO ontology
47054864705665180hypothetical protein
47057114706274564Hypothetical proteinQuickGO ontologyBLASTP
47063324706577246hypothetical protein
47065744707299726hypothetical proteinBLASTP
47073484707554207hypothetical protein
47075914707824234Hypothetical proteinQuickGO ontology
47079804708960981putative integraseQuickGO ontologyBLASTP
470932947106121284Putative Gamma-glutamylputrescine oxidoreductaseQuickGO ontologyBLASTP
4710845471092177tRNA-AspQuickGO ontologyBLASTP
4711012471108877tRNA-AspQuickGO ontologyBLASTP
47113264712099774Putative oxidoreductaseQuickGO ontologyBLASTP
471209647133071212O-succinylhomoserine sulfhydrylaseQuickGO ontologyBLASTP
471336647148711506AmidophosphoribosyltransferaseQuickGO ontologyBLASTP
47149134715473561Putative colicin V production proteinQuickGO ontologyBLASTP
47155634716243681hypothetical proteinBLASTP
471622747175341308Bifunctional protein Dihydrofolate synthase Tetrahydrofolate synthaseQuickGO ontologyBLASTP
47175314718451921Acetyl-CoA carboxylaseQuickGO ontologyBLASTP