Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:4630367 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46300624630370309Putative transporter membrane proteinQuickGO ontologyBLASTP
46303674631077711Putative transporter membrane proteinQuickGO ontologyBLASTP
46311714631935765Conserved hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
46321694633083915putative Transcription factor LysR familyQuickGO ontologyBLASTP
46333224633750429Conserved hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
46341874634540354Putative Kanamycin kinaseQuickGO ontologyBLASTP
46345984634924327Hypothetical proteinQuickGO ontologyBLASTP
46349634635463501Hypothetical proteinQuickGO ontologyBLASTP
46355564636005450hypothetical proteinBLASTP
46361124636993882putative Transcription factor LysR familyQuickGO ontologyBLASTP
46369984637528531Putative acetyltransferaseQuickGO ontologyBLASTP
46383544639211858putative Transcription factor AraC familyQuickGO ontologyBLASTP
46397844639984201hypothetical proteinBLASTP
46400904640515426Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
46407694641077309hypothetical proteinBLASTP
46410494641594546Putative lipoproteinQuickGO ontologyBLASTP
46418024642050249Conserved hypothetical protein putative exported proteinQuickGO ontology
46420624642817756Hypothetical proteinQuickGO ontology
46428804643119240Hypothetical proteinQuickGO ontology
46431274643570444hypothetical protein
46436894644021333Putative transposase IS66 familyQuickGO ontologyBLASTP
46440184644353336Putative transposase IS66 familyQuickGO ontologyBLASTP
464440846460571650Putative transposase IS66 familyQuickGO ontologyBLASTP
46462804647125846Putative pirin proteinQuickGO ontologyBLASTP
46471364647729594Putative oxidoreductaseQuickGO ontologyBLASTP
46477674648387621FMN-dependent NADH-azoreductaseQuickGO ontologyBLASTP
46484944649393900putative Transcription factor LysR familyQuickGO ontologyBLASTP
46496864649958273hypothetical proteinBLASTP
46502054650822618Hypothetical protein putative membrane proteinQuickGO ontology
46512024652071870putative Transcription factor AraC familyQuickGO ontologyBLASTP
46522754652616342Hypothetical protein putative exported proteinQuickGO ontology
46531634653624462hypothetical protein
46541874654567381hypothetical proteinBLASTP
46545854655277693hypothetical proteinBLASTP
46552554655770516Putative phage lysis proteinQuickGO ontologyBLASTP
46557674656192426hypothetical proteinBLASTP
46562504657119870hypothetical proteinBLASTP
46572414657609369Putative phage tail fiber assembly proteinQuickGO ontology
46576064657932327hypothetical proteinBLASTP
465793246590651134Putative phage tail fiber proteinQuickGO ontologyBLASTP
46597534660076324hypothetical proteinBLASTP
466007346636303558Putative phage host specificity proteinQuickGO ontologyBLASTP
46636884664275588Putative phage tail assembly proteinQuickGO ontologyBLASTP
46647314665312582Hypothetical protein putative exported proteinQuickGO ontology