Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:4282815 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42828154283708894putative Transcription factor LysR familyQuickGO ontologyBLASTP
428380342849691167putative transporter membrane proteinQuickGO ontologyBLASTP
42850344285888855putative Transcription factor LysR familyQuickGO ontologyBLASTP
42859954286639645FMN-dependent NADH-azoreductaseQuickGO ontologyBLASTP
42867254287069345hypothetical proteinBLASTP
42872554288142888putative Transcription factor LysR familyQuickGO ontologyBLASTP
42882514288625375Putative tautomeraseQuickGO ontologyBLASTP
428879442909622169second ferric pyoverdine receptorQuickGO ontologyBLASTP
42910984291349252Hypothetical protein putative exported proteinQuickGO ontology
429151742926141098Hypothetical proteinQuickGO ontology
42928734293457585Putative RNA 2-phosphotransferaseQuickGO ontologyBLASTP
42935414293945405Putative thioesteraseQuickGO ontologyBLASTP
42940684294817750Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
42950354295835801Hypothetical proteinQuickGO ontology
42959164296149234Hypothetical proteinQuickGO ontology
42961894296836648hypothetical proteinBLASTP
42970504298003954Chloride peroxidase non-heme chloroperoxidaseQuickGO ontologyBLASTP
42981324298620489putative Transcription factor AsnC familyQuickGO ontologyBLASTP
42986664299322657hypothetical proteinBLASTP
4299413430070512934-aminobutyrate transaminase 4-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
43009944301920927Putative dehydrogenaseQuickGO ontologyBLASTP
43021454303002858Putative acetyltransferaseQuickGO ontologyBLASTP
43030444303751708hypothetical proteinBLASTP