Pre_GI Gene

Some Help

Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:2751342 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
275134227525561215putative histidine kinase ClassicQuickGO ontologyBLASTP
27525252753196672putative response regulator NarL familyQuickGO ontologyBLASTP
27531972753958762putative sensor proteinQuickGO ontologyBLASTP
27540082754934927putative transporter periplasmic proteinQuickGO ontologyBLASTP
27550162755807792putative isomeraseQuickGO ontologyBLASTP
275580427568321029putative oxidoreductaseQuickGO ontologyBLASTP
275702127590121992putative transcription factor Fis familyQuickGO ontologyBLASTP
275937727612181842low affinity potassium transporter membrane proteinQuickGO ontologyBLASTP
27612492762199951putative cation transporter membrane proteinQuickGO ontologyBLASTP
276226627638521587hypothetical proteinBLASTP
276394527650901146putative acyltransferaseQuickGO ontologyBLASTP
27656192766257639hypothetical proteinBLASTP
27662702767007738hypothetical proteinBLASTP
27670552767417363Hypothetical proteinQuickGO ontologyBLASTP
27675242767820297hypothetical proteinBLASTP
276782827689641137putative transporter membrane proteinQuickGO ontologyBLASTP
27690032769347345hypothetical proteinBLASTP
27693562769712357hypothetical proteinBLASTP
276975227710591308putative transporter membrane proteinQuickGO ontologyBLASTP
27713902771704315Hypothetical proteinQuickGO ontology
277188527731261242putative phosphohydrolaseQuickGO ontologyBLASTP
277341627745581143putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP