Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:1600715 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
160071516019501236hypothetical proteinBLASTP
16022081602621414glutathione transferaseQuickGO ontologyBLASTP
160280216041511350Putative diguanylate cyclase with PASPAC and GAF sensorsQuickGO ontologyBLASTP
16044751604969495hypothetical proteinBLASTP
16050591605463405hypothetical proteinBLASTP
16053031605713411Hypothetical proteinQuickGO ontology
16059381606348411hypothetical proteinBLASTP
16063141606565252hypothetical proteinBLASTP
16068471607476630Conserved hypothetical protein membrane proteinQuickGO ontologyBLASTP
16076211608100480putative Transcription factor MarR familyQuickGO ontologyBLASTP
16084001608699300hypothetical proteinBLASTP
16094281609778351Hypothetical proteinQuickGO ontologyBLASTP
16097961610461666Hypothetical proteinQuickGO ontologyBLASTP
16105811610877297hypothetical proteinBLASTP
16108811611141261Hypothetical proteinQuickGO ontology
16116861611937252hypothetical proteinBLASTP
161203416133201287Hypothetical proteinQuickGO ontologyBLASTP
16137731613976204Hypothetical proteinQuickGO ontology
16140561614511456Hypothetical proteinQuickGO ontology
16151531616037885Putative R-3-hydroxydecanoyl-ACPCoA transacylaseQuickGO ontologyBLASTP
16163491617041693ribosomal small subunit pseudouridine synthase AQuickGO ontologyBLASTP
16170771617295219hypothetical proteinBLASTP
16172881618034747Conserved hypothetical protein GGDEF domain-containing proteinQuickGO ontologyBLASTP
161815716199351779allophanate hydrolase urea-1-carboxylate amidohydrolaseQuickGO ontologyBLASTP
161995816235873630Urea carboxylase Allophanate hydrolase subunit 2QuickGO ontologyBLASTP
16238311624472642Putative urea carboxylase-associated protein 1QuickGO ontologyBLASTP
16244841625209726Putative urea carboxylase-associated protein 2QuickGO ontologyBLASTP
16252241626012789putative ABC transporter ATP-binding componentQuickGO ontologyBLASTP
16260091626824816Putative ABC transporter permease componentQuickGO ontologyBLASTP