Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:1151143 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
115114311535302388putative Histidine kinase HybridQuickGO ontologyBLASTP
115353211558802349putative TonB-dependent siderophore receptorQuickGO ontologyBLASTP
115586411569491086putative diguanylate cyclaseQuickGO ontologyBLASTP
115714811587911644Hypothetical proteinQuickGO ontologyBLASTP
11593071159633327Hypothetical proteinQuickGO ontology
11597021160307606Hypothetical proteinQuickGO ontologyBLASTP
11606901161049360hypothetical proteinBLASTP
11612441161561318Hypothetical proteinQuickGO ontology
116315511654432289Hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
116575511675991845Hypothetical protein Predicted NTPase domain NACHT familyQuickGO ontologyBLASTP
11688041169046243hypothetical protein
11691131169820708hypothetical proteinBLASTP
11700471170427381hypothetical proteinBLASTP
11705211171060540hypothetical proteinBLASTP
11716121171779168hypothetical proteinBLASTP
117180511729351131Hypothetical protein putative membrane proteinQuickGO ontologyBLASTP
11729401173269330hypothetical proteinBLASTP
1173620117370485tRNA-LeuQuickGO ontologyBLASTP
117381311748621050S-adenosylmethioninetRNA ribosyltransferase-isomeraseQuickGO ontologyBLASTP
117485911759921134tRNA-guanine transglycosylase queuine tRNA-ribosyltransferaseQuickGO ontologyBLASTP
11760361176374339Putative Sec protein secretion system subunit yajCQuickGO ontologyBLASTP
117643811783061869Putative Sec protein secretion system subunit SecDQuickGO ontologyBLASTP
11783161179230915Putative Sec protein secretion system subunit SecFQuickGO ontologyBLASTP
11793481179896549Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
11810621181880819Inositol-phosphate phosphatase inositol monophosphataseQuickGO ontologyBLASTP
11820251182795771putative tRNArRNA methyltransferaseQuickGO ontologyBLASTP