Pre_GI Gene

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Host: NC_015312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015312:1371530 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13715301372210681hypothetical protein
13721971372742546ECF subfamily RNA polymerase sigma-24 subunitQuickGO ontologyBLASTP
13728601373336477hypothetical protein
13734811373960480hypothetical protein
13740081374427420MerR family transcriptional regulatorQuickGO ontologyBLASTP
13744841375269786Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
13752821375971690alkylmercury lyaseQuickGO ontologyBLASTP
13759761376629654Alkylmercury lyaseQuickGO ontologyBLASTP
13767641377042279hypothetical protein
13770601377422363regulatory protein ArsRQuickGO ontologyBLASTP
137754913789701422mercuric reductaseQuickGO ontologyBLASTP
13789901379433444MerR family transcriptional regulatorQuickGO ontologyBLASTP
13794731379793321NUDIX hydrolaseQuickGO ontology
13800141380313300hypothetical protein
13804281381243816hypothetical proteinBLASTP
13812401381698459hypothetical proteinBLASTP
13830481383422375hypothetical proteinBLASTP
13834191383727309helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
13841091384462354hypothetical protein
13844591385241783nitroreductaseQuickGO ontology
138528213865081227Propanoyl-CoA C-acyltransferaseQuickGO ontologyBLASTP
138653113880961566Long-chain-fatty-acid--CoA ligaseQuickGO ontologyBLASTP
138826313899751713transcriptional regulator CdaRQuickGO ontologyBLASTP
139023213916471416hypothetical proteinBLASTP
13917551392726972LPPGFO 2-phospho-L-lactate transferaseQuickGO ontologyBLASTP
139276313937791017branched-chain amino acid binding proteinQuickGO ontologyBLASTP
139392513950281104luciferase-like proteinQuickGO ontologyBLASTP
139502513958618375-carboxymethyl-2-hydroxymuconate Delta-isomeraseQuickGO ontologyBLASTP
13958581396772915ornithine cyclodeaminasemu-crystallinQuickGO ontologyBLASTP
13967691397680912dihydrodipicolinate synthaseQuickGO ontologyBLASTP