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Query: NC_015312:1371530 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Start: 1371530, End: 1397680, Length: 26151

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-164587BLASTN svgBLASTP svg
NC_014318:9120651*9120651914722326573Amycolatopsis mediterranei U32 chromosome, complete genome6e-128466BLASTN svgBLASTP svg
NC_013947:56828955682895570912926235Stackebrandtia nassauensis DSM 44728 chromosome, complete genome9e-22113BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008712:25024025024026829318054Arthrobacter aurescens TC1 plasmid TC1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009921:87176598717659874014722489Frankia sp. EAN1pec, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007777:135222*13522216590830687Frankia sp. CcI3, complete genome3e-0661.9BLASTN svgBLASTP svg